Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC022215.1-201ENST00000481770 362 ntBASIC5.65□□□□□ -1.5
XRCC1P18887 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.65□□□□□ -1.5
XRCC1P18887 OR7E157P-201ENST00000494376 911 ntBASIC5.65□□□□□ -1.5
XRCC1P18887 AC105420.1-201ENST00000504389 582 ntBASIC5.65□□□□□ -1.5
XRCC1P18887 GLUD1P3-202ENST00000508551 200 ntBASIC5.65□□□□□ -1.5
XRCC1P18887 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.65□□□□□ -1.5
XRCC1P18887 AC106872.4-201ENST00000510050 523 ntBASIC5.65□□□□□ -1.5
XRCC1P18887 SCARNA6.1-201ENST00000516989 238 ntBASIC5.65□□□□□ -1.5
XRCC1P18887 AC021678.3-201ENST00000517893 476 ntBASIC5.65□□□□□ -1.5
XRCC1P18887 IGLV3-30-201ENST00000524362 298 ntBASIC5.65□□□□□ -1.5
XRCC1P18887 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.65□□□□□ -1.5
XRCC1P18887 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.65□□□□□ -1.5
XRCC1P18887 IGBP1P1-201ENST00000554337 1009 ntBASIC5.65□□□□□ -1.5
XRCC1P18887 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.65□□□□□ -1.5
XRCC1P18887 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
XRCC1P18887 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.65□□□□□ -1.5
XRCC1P18887 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.65□□□□□ -1.5
XRCC1P18887 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.65□□□□□ -1.5
XRCC1P18887 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.65□□□□□ -1.5
XRCC1P18887 AC020978.7-201ENST00000575953 1187 ntBASIC5.65□□□□□ -1.5
XRCC1P18887 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.65□□□□□ -1.5
XRCC1P18887 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.65□□□□□ -1.5
XRCC1P18887 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.65□□□□□ -1.5
XRCC1P18887 AC015802.2-201ENST00000589690 189 ntBASIC5.65□□□□□ -1.5
XRCC1P18887 AL353684.1-201ENST00000622677 1120 ntBASIC5.65□□□□□ -1.5
XRCC1P18887 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
XRCC1P18887 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
XRCC1P18887 AP001029.2-203ENST00000589795 4910 ntBASIC5.65□□□□□ -1.51
XRCC1P18887 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
XRCC1P18887 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
XRCC1P18887 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
XRCC1P18887 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
XRCC1P18887 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.51
XRCC1P18887 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.64□□□□□ -1.51
XRCC1P18887 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.64□□□□□ -1.51
XRCC1P18887 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
XRCC1P18887 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
XRCC1P18887 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
XRCC1P18887 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
XRCC1P18887 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
XRCC1P18887 AL132656.3-201ENST00000606384 1595 ntBASIC5.64□□□□□ -1.51
XRCC1P18887 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
XRCC1P18887 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
XRCC1P18887 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
XRCC1P18887 RNA5SP46-201ENST00000362370 120 ntBASIC5.64□□□□□ -1.51
XRCC1P18887 BMS1P17-202ENST00000416720 316 ntBASIC5.64□□□□□ -1.51
XRCC1P18887 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.64□□□□□ -1.51
XRCC1P18887 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.64□□□□□ -1.51
XRCC1P18887 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
XRCC1P18887 AC096775.1-201ENST00000437724 448 ntBASIC5.64□□□□□ -1.51
XRCC1P18887 AC002504.1-201ENST00000438281 691 ntBASIC5.64□□□□□ -1.51
XRCC1P18887 RPL5P25-201ENST00000441148 775 ntBASIC5.64□□□□□ -1.51
XRCC1P18887 AC015983.1-201ENST00000441577 373 ntBASIC5.64□□□□□ -1.51
XRCC1P18887 YWHAEP1-201ENST00000453697 763 ntBASIC5.64□□□□□ -1.51
XRCC1P18887 AC023141.9-201ENST00000458734 412 ntBASIC5.64□□□□□ -1.51
XRCC1P18887 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.64□□□□□ -1.51
XRCC1P18887 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.64□□□□□ -1.51
XRCC1P18887 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.64□□□□□ -1.51
XRCC1P18887 AC074255.1-201ENST00000511259 501 ntBASIC5.64□□□□□ -1.51
XRCC1P18887 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.64□□□□□ -1.51
XRCC1P18887 AC084824.2-201ENST00000548906 345 ntBASIC5.64□□□□□ -1.51
XRCC1P18887 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.64□□□□□ -1.51
XRCC1P18887 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC5.64□□□□□ -1.51
XRCC1P18887 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.64□□□□□ -1.51
XRCC1P18887 AL163952.1-202ENST00000569625 600 ntBASIC5.64□□□□□ -1.51
XRCC1P18887 AC019322.1-201ENST00000571869 389 ntBASIC5.64□□□□□ -1.51
XRCC1P18887 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.64□□□□□ -1.51
XRCC1P18887 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.64□□□□□ -1.51
XRCC1P18887 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.64□□□□□ -1.51
XRCC1P18887 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.64□□□□□ -1.51
XRCC1P18887 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
XRCC1P18887 AL353729.2-201ENST00000605859 1249 ntBASIC5.64□□□□□ -1.51
XRCC1P18887 AC007786.3-201ENST00000615154 596 ntBASIC5.64□□□□□ -1.51
XRCC1P18887 MIR6729-201ENST00000618194 65 ntBASIC5.64□□□□□ -1.51
XRCC1P18887 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.64□□□□□ -1.51
XRCC1P18887 AC087565.3-203ENST00000641018 837 ntBASIC5.64□□□□□ -1.51
XRCC1P18887 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
XRCC1P18887 AC117409.1-201ENST00000470499 1310 ntBASIC5.64□□□□□ -1.51
XRCC1P18887 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
XRCC1P18887 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
XRCC1P18887 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
XRCC1P18887 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
XRCC1P18887 AC120036.2-201ENST00000509729 1474 ntBASIC5.64□□□□□ -1.51
XRCC1P18887 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
XRCC1P18887 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.64□□□□□ -1.51
XRCC1P18887 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
XRCC1P18887 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
XRCC1P18887 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.63□□□□□ -1.51
XRCC1P18887 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
XRCC1P18887 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.63□□□□□ -1.51
XRCC1P18887 BCORP1-203ENST00000513194 5093 ntBASIC5.63□□□□□ -1.51
XRCC1P18887 OR2AT2P-201ENST00000413438 905 ntBASIC5.63□□□□□ -1.51
XRCC1P18887 REREP1Y-201ENST00000422655 198 ntBASIC5.63□□□□□ -1.51
XRCC1P18887 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
XRCC1P18887 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.63□□□□□ -1.51
XRCC1P18887 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.63□□□□□ -1.51
XRCC1P18887 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.63□□□□□ -1.51
XRCC1P18887 REREP2Y-201ENST00000439103 200 ntBASIC5.63□□□□□ -1.51
XRCC1P18887 AP000281.1-201ENST00000444036 316 ntBASIC5.63□□□□□ -1.51
XRCC1P18887 RPS23P6-201ENST00000466136 431 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 422.4 ms