Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TOP1P11387 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
TOP1P11387 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TOP1P11387 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
TOP1P11387 AC083837.1-201ENST00000565297 2994 ntBASIC6.6□□□□□ -1.35
TOP1P11387 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.6□□□□□ -1.35
TOP1P11387 SAMM50P1-201ENST00000455403 1399 ntBASIC6.6□□□□□ -1.35
TOP1P11387 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TOP1P11387 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TOP1P11387 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.6□□□□□ -1.35
TOP1P11387 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.6□□□□□ -1.35
TOP1P11387 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.6□□□□□ -1.35
TOP1P11387 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
TOP1P11387 RNA5SP453-201ENST00000362503 119 ntBASIC6.6□□□□□ -1.35
TOP1P11387 RN7SKP124-201ENST00000364730 341 ntBASIC6.6□□□□□ -1.35
TOP1P11387 RN7SKP279-201ENST00000411383 298 ntBASIC6.6□□□□□ -1.35
TOP1P11387 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.6□□□□□ -1.35
TOP1P11387 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.6□□□□□ -1.35
TOP1P11387 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC6.6□□□□□ -1.35
TOP1P11387 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC6.6□□□□□ -1.35
TOP1P11387 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6.6□□□□□ -1.35
TOP1P11387 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.6□□□□□ -1.35
TOP1P11387 RPL12P39-201ENST00000455456 496 ntBASIC6.6□□□□□ -1.35
TOP1P11387 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.6□□□□□ -1.35
TOP1P11387 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
TOP1P11387 MRPS21P7-201ENST00000566937 238 ntBASIC6.6□□□□□ -1.35
TOP1P11387 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
TOP1P11387 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
TOP1P11387 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.6□□□□□ -1.35
TOP1P11387 MIR4311-201ENST00000580794 100 ntBASIC6.6□□□□□ -1.35
TOP1P11387 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.6□□□□□ -1.35
TOP1P11387 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TOP1P11387 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TOP1P11387 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.6□□□□□ -1.35
TOP1P11387 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
TOP1P11387 PWAR1-201ENST00000624188 2414 ntBASIC6.6□□□□□ -1.35
TOP1P11387 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.6□□□□□ -1.35
TOP1P11387 MTCO1P11-201ENST00000429111 1528 ntBASIC6.6□□□□□ -1.35
TOP1P11387 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
TOP1P11387 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.6□□□□□ -1.35
TOP1P11387 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TOP1P11387 AC123769.1-201ENST00000530992 3192 ntBASIC6.59□□□□□ -1.35
TOP1P11387 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
TOP1P11387 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.59□□□□□ -1.35
TOP1P11387 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.59□□□□□ -1.35
TOP1P11387 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
TOP1P11387 AC092451.3-201ENST00000625067 1343 ntBASIC6.59□□□□□ -1.35
TOP1P11387 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TOP1P11387 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.59□□□□□ -1.35
TOP1P11387 RNA5SP132-201ENST00000364725 118 ntBASIC6.59□□□□□ -1.35
TOP1P11387 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.59□□□□□ -1.35
TOP1P11387 RNGTTP1-201ENST00000420965 728 ntBASIC6.59□□□□□ -1.35
TOP1P11387 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.59□□□□□ -1.35
TOP1P11387 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.59□□□□□ -1.35
TOP1P11387 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.59□□□□□ -1.35
TOP1P11387 AC018638.3-201ENST00000461273 132 ntBASIC6.59□□□□□ -1.35
TOP1P11387 CR383656.1-201ENST00000484916 377 ntBASIC6.59□□□□□ -1.35
TOP1P11387 PDCL3P4-201ENST00000489621 720 ntBASIC6.59□□□□□ -1.35
TOP1P11387 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
TOP1P11387 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.59□□□□□ -1.35
TOP1P11387 RPL7L1P4-201ENST00000513004 707 ntBASIC6.59□□□□□ -1.35
TOP1P11387 AC097486.1-201ENST00000515331 210 ntBASIC6.59□□□□□ -1.35
TOP1P11387 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.59□□□□□ -1.35
TOP1P11387 HMGN2P47-201ENST00000559378 272 ntBASIC6.59□□□□□ -1.35
TOP1P11387 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.59□□□□□ -1.35
TOP1P11387 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.59□□□□□ -1.35
TOP1P11387 DHFRP1-201ENST00000579682 559 ntBASIC6.59□□□□□ -1.35
TOP1P11387 AC107993.1-201ENST00000591343 684 ntBASIC6.59□□□□□ -1.35
TOP1P11387 PPATP2-201ENST00000605635 508 ntBASIC6.59□□□□□ -1.35
TOP1P11387 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6.59□□□□□ -1.35
TOP1P11387 AC079776.5-201ENST00000641920 211 ntBASIC6.59□□□□□ -1.35
TOP1P11387 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TOP1P11387 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TOP1P11387 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.59□□□□□ -1.35
TOP1P11387 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
TOP1P11387 ICE2P1-201ENST00000512800 1849 ntBASIC6.59□□□□□ -1.35
TOP1P11387 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.59□□□□□ -1.35
TOP1P11387 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.59□□□□□ -1.35
TOP1P11387 AC114774.1-201ENST00000507410 1770 ntBASIC6.59□□□□□ -1.35
TOP1P11387 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
TOP1P11387 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
TOP1P11387 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
TOP1P11387 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TOP1P11387 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TOP1P11387 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TOP1P11387 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.58□□□□□ -1.36
TOP1P11387 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TOP1P11387 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TOP1P11387 GAPDHP24-201ENST00000328713 983 ntBASIC6.58□□□□□ -1.36
TOP1P11387 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
TOP1P11387 OR3A2-201ENST00000408891 1076 ntBASIC6.58□□□□□ -1.36
TOP1P11387 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC6.58□□□□□ -1.36
TOP1P11387 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.58□□□□□ -1.36
TOP1P11387 AC012075.1-201ENST00000436549 580 ntBASIC6.58□□□□□ -1.36
TOP1P11387 AL390119.1-201ENST00000440329 312 ntBASIC6.58□□□□□ -1.36
TOP1P11387 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.58□□□□□ -1.36
TOP1P11387 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.58□□□□□ -1.36
TOP1P11387 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.58□□□□□ -1.36
TOP1P11387 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.58□□□□□ -1.36
TOP1P11387 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms