Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HLA-DOAP06340 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HLA-DOAP06340 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
HLA-DOAP06340 AC007842.1-201ENST00000597336 2039 ntBASIC6.83□□□□□ -1.32
HLA-DOAP06340 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
HLA-DOAP06340 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HLA-DOAP06340 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HLA-DOAP06340 AL034546.1-201ENST00000623740 3693 ntBASIC6.82□□□□□ -1.32
HLA-DOAP06340 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
HLA-DOAP06340 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
HLA-DOAP06340 MFSD8-219ENST00000641228 2559 ntBASIC6.82□□□□□ -1.32
HLA-DOAP06340 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.82□□□□□ -1.32
HLA-DOAP06340 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HLA-DOAP06340 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
HLA-DOAP06340 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.82□□□□□ -1.32
HLA-DOAP06340 LINC02019-201ENST00000608605 2060 ntBASIC6.82□□□□□ -1.32
HLA-DOAP06340 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HLA-DOAP06340 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HLA-DOAP06340 AL391422.1-201ENST00000402155 436 ntBASIC6.82□□□□□ -1.32
HLA-DOAP06340 UBE2V1P15-201ENST00000407776 448 ntBASIC6.82□□□□□ -1.32
HLA-DOAP06340 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.82□□□□□ -1.32
HLA-DOAP06340 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC6.82□□□□□ -1.32
HLA-DOAP06340 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC6.82□□□□□ -1.32
HLA-DOAP06340 AL590623.1-201ENST00000427864 105 ntBASIC6.82□□□□□ -1.32
HLA-DOAP06340 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC6.82□□□□□ -1.32
HLA-DOAP06340 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC6.82□□□□□ -1.32
HLA-DOAP06340 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HLA-DOAP06340 DUTP7-201ENST00000507982 486 ntBASIC6.82□□□□□ -1.32
HLA-DOAP06340 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HLA-DOAP06340 AC025768.1-201ENST00000510057 267 ntBASIC6.82□□□□□ -1.32
HLA-DOAP06340 AC021733.2-201ENST00000518830 497 ntBASIC6.82□□□□□ -1.32
HLA-DOAP06340 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.82□□□□□ -1.32
HLA-DOAP06340 IGKV2-18-201ENST00000522607 343 ntBASIC6.82□□□□□ -1.32
HLA-DOAP06340 AC090424.1-201ENST00000535243 736 ntBASIC6.82□□□□□ -1.32
HLA-DOAP06340 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC6.82□□□□□ -1.32
HLA-DOAP06340 AC244502.2-201ENST00000543361 851 ntBASIC6.82□□□□□ -1.32
HLA-DOAP06340 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC6.82□□□□□ -1.32
HLA-DOAP06340 AC096996.1-201ENST00000563813 325 ntBASIC6.82□□□□□ -1.32
HLA-DOAP06340 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.82□□□□□ -1.32
HLA-DOAP06340 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC6.82□□□□□ -1.32
HLA-DOAP06340 AC063977.5-201ENST00000601044 974 ntBASIC6.82□□□□□ -1.32
HLA-DOAP06340 AC005776.1-201ENST00000603164 290 ntBASIC6.82□□□□□ -1.32
HLA-DOAP06340 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC6.82□□□□□ -1.32
HLA-DOAP06340 BX323046.1-201ENST00000610145 535 ntBASIC6.82□□□□□ -1.32
HLA-DOAP06340 AL162233.1-201ENST00000620014 944 ntBASIC6.82□□□□□ -1.32
HLA-DOAP06340 AC010872.1-201ENST00000624225 675 ntBASIC6.82□□□□□ -1.32
HLA-DOAP06340 AP003485.1-201ENST00000625093 753 ntBASIC6.82□□□□□ -1.32
HLA-DOAP06340 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC6.82□□□□□ -1.32
HLA-DOAP06340 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.82□□□□□ -1.32
HLA-DOAP06340 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HLA-DOAP06340 CR788268.1-201ENST00000603931 1809 ntBASIC6.82□□□□□ -1.32
HLA-DOAP06340 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
HLA-DOAP06340 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
HLA-DOAP06340 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
HLA-DOAP06340 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.82□□□□□ -1.32
HLA-DOAP06340 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.82□□□□□ -1.32
HLA-DOAP06340 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
HLA-DOAP06340 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
HLA-DOAP06340 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HLA-DOAP06340 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HLA-DOAP06340 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HLA-DOAP06340 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.82□□□□□ -1.32
HLA-DOAP06340 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HLA-DOAP06340 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.81□□□□□ -1.32
HLA-DOAP06340 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HLA-DOAP06340 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
HLA-DOAP06340 AP000866.6-201ENST00000638898 3579 ntBASIC6.81□□□□□ -1.32
HLA-DOAP06340 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
HLA-DOAP06340 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HLA-DOAP06340 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HLA-DOAP06340 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HLA-DOAP06340 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
HLA-DOAP06340 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
HLA-DOAP06340 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC6.81□□□□□ -1.32
HLA-DOAP06340 AL607077.1-201ENST00000401718 499 ntBASIC6.81□□□□□ -1.32
HLA-DOAP06340 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC6.81□□□□□ -1.32
HLA-DOAP06340 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HLA-DOAP06340 Z80107.1-201ENST00000436830 412 ntBASIC6.81□□□□□ -1.32
HLA-DOAP06340 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC6.81□□□□□ -1.32
HLA-DOAP06340 OR7E116P-201ENST00000448529 957 ntBASIC6.81□□□□□ -1.32
HLA-DOAP06340 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC6.81□□□□□ -1.32
HLA-DOAP06340 EIF2S2P4-201ENST00000461070 984 ntBASIC6.81□□□□□ -1.32
HLA-DOAP06340 ATP5G1P3-201ENST00000463301 410 ntBASIC6.81□□□□□ -1.32
HLA-DOAP06340 SIAH1P1-201ENST00000479411 923 ntBASIC6.81□□□□□ -1.32
HLA-DOAP06340 AC092902.1-201ENST00000486999 259 ntBASIC6.81□□□□□ -1.32
HLA-DOAP06340 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC6.81□□□□□ -1.32
HLA-DOAP06340 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.81□□□□□ -1.32
HLA-DOAP06340 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC6.81□□□□□ -1.32
HLA-DOAP06340 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC6.81□□□□□ -1.32
HLA-DOAP06340 NRBF2P4-201ENST00000520874 850 ntBASIC6.81□□□□□ -1.32
HLA-DOAP06340 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.81□□□□□ -1.32
HLA-DOAP06340 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.81□□□□□ -1.32
HLA-DOAP06340 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.81□□□□□ -1.32
HLA-DOAP06340 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.81□□□□□ -1.32
HLA-DOAP06340 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC6.81□□□□□ -1.32
HLA-DOAP06340 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.81□□□□□ -1.32
HLA-DOAP06340 RBM22P12-201ENST00000567098 1255 ntBASIC6.81□□□□□ -1.32
HLA-DOAP06340 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC6.81□□□□□ -1.32
HLA-DOAP06340 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.81□□□□□ -1.32
HLA-DOAP06340 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms