Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 RN7SKP15-201ENST00000364742 309 ntBASIC4.39□□□□□ -1.71
TRGV3P03979 RN7SKP292-201ENST00000365522 317 ntBASIC4.39□□□□□ -1.71
TRGV3P03979 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRGV3P03979 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
TRGV3P03979 RNA5SP122-201ENST00000384457 108 ntBASIC4.39□□□□□ -1.71
TRGV3P03979 AL031985.1-201ENST00000392713 418 ntBASIC4.39□□□□□ -1.71
TRGV3P03979 RNA5SP178-201ENST00000410380 128 ntBASIC4.39□□□□□ -1.71
TRGV3P03979 RN7SKP286-201ENST00000410894 299 ntBASIC4.39□□□□□ -1.71
TRGV3P03979 RNF10P1-201ENST00000418589 369 ntBASIC4.39□□□□□ -1.71
TRGV3P03979 NENFP1-201ENST00000419476 466 ntBASIC4.39□□□□□ -1.71
TRGV3P03979 AC093155.2-201ENST00000420734 937 ntBASIC4.39□□□□□ -1.71
TRGV3P03979 OR5W1P-201ENST00000423705 938 ntBASIC4.39□□□□□ -1.71
TRGV3P03979 AC006335.2-201ENST00000437993 330 ntBASIC4.39□□□□□ -1.71
TRGV3P03979 HMGN1P36-201ENST00000446623 298 ntBASIC4.39□□□□□ -1.71
TRGV3P03979 ATP5LP5-201ENST00000483050 299 ntBASIC4.39□□□□□ -1.71
TRGV3P03979 PPIAP19-201ENST00000486414 492 ntBASIC4.39□□□□□ -1.71
TRGV3P03979 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC4.39□□□□□ -1.71
TRGV3P03979 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC4.39□□□□□ -1.71
TRGV3P03979 CSNK1A1P3-201ENST00000504105 330 ntBASIC4.39□□□□□ -1.71
TRGV3P03979 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC4.39□□□□□ -1.71
TRGV3P03979 MTATP6P1-201ENST00000514057 681 ntBASIC4.39□□□□□ -1.71
TRGV3P03979 GAPDHP62-201ENST00000515313 990 ntBASIC4.39□□□□□ -1.71
TRGV3P03979 MYL6-213ENST00000549017 502 ntTSL 3 BASIC4.39□□□□□ -1.71
TRGV3P03979 HSPE1P2-201ENST00000554777 306 ntBASIC4.39□□□□□ -1.71
TRGV3P03979 NPM1P5-201ENST00000557228 838 ntBASIC4.39□□□□□ -1.71
TRGV3P03979 AC010547.6-201ENST00000571789 193 ntBASIC4.39□□□□□ -1.71
TRGV3P03979 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC4.39□□□□□ -1.71
TRGV3P03979 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC4.39□□□□□ -1.71
TRGV3P03979 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC4.39□□□□□ -1.71
TRGV3P03979 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.39□□□□□ -1.71
TRGV3P03979 AC026124.2-201ENST00000621847 656 ntBASIC4.39□□□□□ -1.71
TRGV3P03979 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TRGV3P03979 OR13C1P-202ENST00000641378 2919 ntBASIC4.39□□□□□ -1.71
TRGV3P03979 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC4.39□□□□□ -1.71
TRGV3P03979 AP000432.2-201ENST00000624164 2048 ntBASIC4.39□□□□□ -1.71
TRGV3P03979 AC109446.4-201ENST00000623235 2755 ntBASIC4.39□□□□□ -1.71
TRGV3P03979 MT-RNR2-201ENST00000387347 1559 ntBASIC4.39□□□□□ -1.71
TRGV3P03979 RNF19BPY-201ENST00000458209 1550 ntBASIC4.39□□□□□ -1.71
TRGV3P03979 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRGV3P03979 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRGV3P03979 AL137058.3-201ENST00000624531 3099 ntBASIC4.39□□□□□ -1.71
TRGV3P03979 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRGV3P03979 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRGV3P03979 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.38□□□□□ -1.71
TRGV3P03979 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TRGV3P03979 Z95331.1-201ENST00000623075 23112 ntBASIC4.38□□□□□ -1.71
TRGV3P03979 AC232271.1-201ENST00000602455 2715 ntBASIC4.38□□□□□ -1.71
TRGV3P03979 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC4.38□□□□□ -1.71
TRGV3P03979 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.38□□□□□ -1.71
TRGV3P03979 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
TRGV3P03979 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
TRGV3P03979 AC104964.3-201ENST00000606115 2860 ntBASIC4.38□□□□□ -1.71
TRGV3P03979 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRGV3P03979 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRGV3P03979 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRGV3P03979 OR4F13P-202ENST00000560066 2054 ntBASIC4.38□□□□□ -1.71
TRGV3P03979 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRGV3P03979 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
TRGV3P03979 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRGV3P03979 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRGV3P03979 RNA5SP453-201ENST00000362503 119 ntBASIC4.38□□□□□ -1.71
TRGV3P03979 RNA5SP326-201ENST00000363209 110 ntBASIC4.38□□□□□ -1.71
TRGV3P03979 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRGV3P03979 AC005042.1-201ENST00000393397 800 ntBASIC4.38□□□□□ -1.71
TRGV3P03979 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
TRGV3P03979 AL009179.1-201ENST00000406085 265 ntBASIC4.38□□□□□ -1.71
TRGV3P03979 GAPDHP42-201ENST00000406848 981 ntBASIC4.38□□□□□ -1.71
TRGV3P03979 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
TRGV3P03979 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC4.38□□□□□ -1.71
TRGV3P03979 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.38□□□□□ -1.71
TRGV3P03979 TNPO1P1-201ENST00000423641 1138 ntBASIC4.38□□□□□ -1.71
TRGV3P03979 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.38□□□□□ -1.71
TRGV3P03979 RPL5P2-201ENST00000429598 854 ntBASIC4.38□□□□□ -1.71
TRGV3P03979 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TRGV3P03979 AC002504.1-201ENST00000438281 691 ntBASIC4.38□□□□□ -1.71
TRGV3P03979 NANOGP9-201ENST00000439890 892 ntBASIC4.38□□□□□ -1.71
TRGV3P03979 UBE2V2P4-201ENST00000447495 259 ntBASIC4.38□□□□□ -1.71
TRGV3P03979 AP000547.1-201ENST00000454360 617 ntBASIC4.38□□□□□ -1.71
TRGV3P03979 RPL12P24-201ENST00000474907 486 ntBASIC4.38□□□□□ -1.71
TRGV3P03979 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.38□□□□□ -1.71
TRGV3P03979 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TRGV3P03979 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC4.38□□□□□ -1.71
TRGV3P03979 GLUD1P3-202ENST00000508551 200 ntBASIC4.38□□□□□ -1.71
TRGV3P03979 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.38□□□□□ -1.71
TRGV3P03979 AC097486.1-201ENST00000515331 210 ntBASIC4.38□□□□□ -1.71
TRGV3P03979 RN7SKP99-201ENST00000517028 307 ntBASIC4.38□□□□□ -1.71
TRGV3P03979 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC4.38□□□□□ -1.71
TRGV3P03979 LDHC-205ENST00000537486 583 ntTSL 5 BASIC4.38□□□□□ -1.71
TRGV3P03979 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC4.38□□□□□ -1.71
TRGV3P03979 MRPS21P7-201ENST00000566937 238 ntBASIC4.38□□□□□ -1.71
TRGV3P03979 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC4.38□□□□□ -1.71
TRGV3P03979 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC4.38□□□□□ -1.71
TRGV3P03979 MIR4505-201ENST00000582238 73 ntBASIC4.38□□□□□ -1.71
TRGV3P03979 MIR4310-201ENST00000582950 57 ntBASIC4.38□□□□□ -1.71
TRGV3P03979 H3F3BP2-201ENST00000583907 357 ntBASIC4.38□□□□□ -1.71
TRGV3P03979 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.38□□□□□ -1.71
TRGV3P03979 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.38□□□□□ -1.71
TRGV3P03979 RN7SL787P-201ENST00000613000 284 ntBASIC4.38□□□□□ -1.71
TRGV3P03979 AC007683.2-201ENST00000624681 714 ntBASIC4.38□□□□□ -1.71
TRGV3P03979 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms