Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SHANK2Q9UPX8 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC8.2□□□□□ -1.1
SHANK2Q9UPX8 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC8.2□□□□□ -1.1
SHANK2Q9UPX8 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC8.2□□□□□ -1.1
SHANK2Q9UPX8 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
SHANK2Q9UPX8 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
SHANK2Q9UPX8 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC8.2□□□□□ -1.1
SHANK2Q9UPX8 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC8.2□□□□□ -1.1
SHANK2Q9UPX8 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SHANK2Q9UPX8 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
SHANK2Q9UPX8 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
SHANK2Q9UPX8 SNORA17.1-201ENST00000362945 126 ntBASIC8.19□□□□□ -1.1
SHANK2Q9UPX8 AL133388.1-201ENST00000404509 287 ntBASIC8.19□□□□□ -1.1
SHANK2Q9UPX8 OR4K12P-201ENST00000406538 961 ntBASIC8.19□□□□□ -1.1
SHANK2Q9UPX8 OR10T1P-201ENST00000424327 947 ntBASIC8.19□□□□□ -1.1
SHANK2Q9UPX8 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC8.19□□□□□ -1.1
SHANK2Q9UPX8 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC8.19□□□□□ -1.1
SHANK2Q9UPX8 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC8.19□□□□□ -1.1
SHANK2Q9UPX8 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC8.19□□□□□ -1.1
SHANK2Q9UPX8 RPS3AP41-201ENST00000462701 778 ntBASIC8.19□□□□□ -1.1
SHANK2Q9UPX8 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC8.19□□□□□ -1.1
SHANK2Q9UPX8 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC8.19□□□□□ -1.1
SHANK2Q9UPX8 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC8.19□□□□□ -1.1
SHANK2Q9UPX8 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC8.19□□□□□ -1.1
SHANK2Q9UPX8 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
SHANK2Q9UPX8 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
SHANK2Q9UPX8 ZNF733P-202ENST00000444809 1573 ntBASIC8.19□□□□□ -1.1
SHANK2Q9UPX8 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
SHANK2Q9UPX8 AC007114.2-201ENST00000576014 4281 ntBASIC8.19□□□□□ -1.1
SHANK2Q9UPX8 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC8.19□□□□□ -1.1
SHANK2Q9UPX8 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
SHANK2Q9UPX8 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
SHANK2Q9UPX8 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SHANK2Q9UPX8 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SHANK2Q9UPX8 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SHANK2Q9UPX8 LRRC37A16P-202ENST00000586022 3725 ntBASIC8.19□□□□□ -1.1
SHANK2Q9UPX8 STRADBP1-201ENST00000478954 1281 ntBASIC8.19□□□□□ -1.1
SHANK2Q9UPX8 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC8.19□□□□□ -1.1
SHANK2Q9UPX8 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC8.19□□□□□ -1.1
SHANK2Q9UPX8 RN7SL356P-201ENST00000582228 248 ntBASIC8.19□□□□□ -1.1
SHANK2Q9UPX8 TEX41-254ENST00000626394 423 ntTSL 5 BASIC8.19□□□□□ -1.1
SHANK2Q9UPX8 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SHANK2Q9UPX8 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC8.18□□□□□ -1.1
SHANK2Q9UPX8 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SHANK2Q9UPX8 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC8.18□□□□□ -1.1
SHANK2Q9UPX8 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SHANK2Q9UPX8 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SHANK2Q9UPX8 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SHANK2Q9UPX8 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC8.18□□□□□ -1.1
SHANK2Q9UPX8 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC8.18□□□□□ -1.1
SHANK2Q9UPX8 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC8.18□□□□□ -1.1
SHANK2Q9UPX8 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC8.18□□□□□ -1.1
SHANK2Q9UPX8 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
SHANK2Q9UPX8 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
SHANK2Q9UPX8 HNRNPA3P4-201ENST00000427514 803 ntBASIC8.18□□□□□ -1.1
SHANK2Q9UPX8 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC8.18□□□□□ -1.1
SHANK2Q9UPX8 FAM96AP1-201ENST00000430879 482 ntBASIC8.18□□□□□ -1.1
SHANK2Q9UPX8 GSTM5P1-201ENST00000434751 660 ntBASIC8.18□□□□□ -1.1
SHANK2Q9UPX8 SNORD125-201ENST00000459538 96 ntBASIC8.18□□□□□ -1.1
SHANK2Q9UPX8 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC8.18□□□□□ -1.1
SHANK2Q9UPX8 AC063949.1-201ENST00000552900 865 ntBASIC8.18□□□□□ -1.1
SHANK2Q9UPX8 AP000769.2-201ENST00000602344 396 ntBASIC8.18□□□□□ -1.1
SHANK2Q9UPX8 UG0898H09-202ENST00000623646 7040 ntBASIC8.18□□□□□ -1.1
SHANK2Q9UPX8 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
SHANK2Q9UPX8 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SHANK2Q9UPX8 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
SHANK2Q9UPX8 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SHANK2Q9UPX8 AL589993.1-201ENST00000407450 2524 ntBASIC8.18□□□□□ -1.1
SHANK2Q9UPX8 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SHANK2Q9UPX8 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
SHANK2Q9UPX8 OR4F13P-202ENST00000560066 2054 ntBASIC8.17□□□□□ -1.1
SHANK2Q9UPX8 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
SHANK2Q9UPX8 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SHANK2Q9UPX8 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SHANK2Q9UPX8 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC8.17□□□□□ -1.1
SHANK2Q9UPX8 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC8.17□□□□□ -1.1
SHANK2Q9UPX8 AC232271.1-201ENST00000602455 2715 ntBASIC8.17□□□□□ -1.1
SHANK2Q9UPX8 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SHANK2Q9UPX8 AL009179.1-201ENST00000406085 265 ntBASIC8.17□□□□□ -1.1
SHANK2Q9UPX8 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC8.17□□□□□ -1.1
SHANK2Q9UPX8 AC096921.1-201ENST00000411661 375 ntBASIC8.17□□□□□ -1.1
SHANK2Q9UPX8 RIMKLBP2-201ENST00000424737 654 ntBASIC8.17□□□□□ -1.1
SHANK2Q9UPX8 AC092651.1-201ENST00000426110 312 ntBASIC8.17□□□□□ -1.1
SHANK2Q9UPX8 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC8.17□□□□□ -1.1
SHANK2Q9UPX8 RPL12P17-201ENST00000432393 498 ntBASIC8.17□□□□□ -1.1
SHANK2Q9UPX8 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC8.17□□□□□ -1.1
SHANK2Q9UPX8 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC8.17□□□□□ -1.1
SHANK2Q9UPX8 RPL5P22-201ENST00000480199 884 ntBASIC8.17□□□□□ -1.1
SHANK2Q9UPX8 RN7SL591P-201ENST00000496150 292 ntBASIC8.17□□□□□ -1.1
SHANK2Q9UPX8 BRD9P1-201ENST00000529855 560 ntBASIC8.17□□□□□ -1.1
SHANK2Q9UPX8 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC8.17□□□□□ -1.1
SHANK2Q9UPX8 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC8.17□□□□□ -1.1
SHANK2Q9UPX8 AC009237.13-201ENST00000603193 276 ntBASIC8.17□□□□□ -1.1
SHANK2Q9UPX8 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC8.17□□□□□ -1.1
SHANK2Q9UPX8 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC8.17□□□□□ -1.1
SHANK2Q9UPX8 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC8.17□□□□□ -1.1
SHANK2Q9UPX8 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
SHANK2Q9UPX8 AC013268.3-201ENST00000262716 2324 ntBASIC8.17□□□□□ -1.1
SHANK2Q9UPX8 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
SHANK2Q9UPX8 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms