Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 RNU6-792P-201ENST00000363490 107 ntBASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 RNA5SP514-201ENST00000363717 111 ntBASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 U3.52-201ENST00000384034 216 ntBASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 Y_RNA.436-201ENST00000384097 102 ntBASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 GAPDHP15-201ENST00000398586 975 ntBASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 AL445238.1-204ENST00000400311 463 ntBASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 RPL7P58-201ENST00000402913 758 ntBASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 AL096800.1-201ENST00000405326 893 ntBASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 KRR1P1-201ENST00000419430 803 ntBASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 AKR1B10P1-201ENST00000425765 942 ntBASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 AC010153.1-201ENST00000432862 727 ntBASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 AL365220.1-201ENST00000432923 399 ntBASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 AL645939.3-201ENST00000435408 225 ntBASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 AC128677.1-201ENST00000436016 442 ntBASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 GAPDHP37-201ENST00000442317 968 ntBASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 Z73417.1-201ENST00000447373 778 ntBASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 ZNF886P-201ENST00000450781 723 ntBASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 NPM1P17-201ENST00000479221 602 ntBASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 BET1P1-201ENST00000482276 359 ntBASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 RNU5A-7P-201ENST00000515979 116 ntBASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 SNORA76.2-201ENST00000517095 137 ntBASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 UBTFL9-201ENST00000534504 1148 ntBASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 AC037479.1-201ENST00000558361 625 ntBASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 AC023825.1-201ENST00000566704 1030 ntBASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 AC007599.1-201ENST00000568688 1174 ntBASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 RN7SL475P-201ENST00000583379 298 ntBASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 RPL29P33-201ENST00000587474 316 ntBASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 NPIPB1P-202ENST00000588786 828 ntBASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 AC011500.1-201ENST00000601963 469 ntBASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 AL606834.3-201ENST00000602615 496 ntBASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 NDUFB9P1-201ENST00000604683 510 ntBASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 AC004241.3-201ENST00000611728 517 ntBASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
PACSIN3Q9UKS6 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.96□□□□□ -1.45
PACSIN3Q9UKS6 AP000641.1-201ENST00000531988 1639 ntBASIC5.96□□□□□ -1.45
PACSIN3Q9UKS6 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
PACSIN3Q9UKS6 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.96□□□□□ -1.46
PACSIN3Q9UKS6 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PACSIN3Q9UKS6 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.96□□□□□ -1.46
PACSIN3Q9UKS6 AC099654.3-201ENST00000447087 1546 ntBASIC5.96□□□□□ -1.46
PACSIN3Q9UKS6 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.96□□□□□ -1.46
PACSIN3Q9UKS6 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
PACSIN3Q9UKS6 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PACSIN3Q9UKS6 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
PACSIN3Q9UKS6 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.96□□□□□ -1.46
PACSIN3Q9UKS6 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PACSIN3Q9UKS6 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PACSIN3Q9UKS6 PPIAP24-201ENST00000328558 471 ntBASIC5.96□□□□□ -1.46
PACSIN3Q9UKS6 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PACSIN3Q9UKS6 RN7SKP250-201ENST00000363924 321 ntBASIC5.96□□□□□ -1.46
PACSIN3Q9UKS6 RNA5SP140-201ENST00000364524 92 ntBASIC5.96□□□□□ -1.46
PACSIN3Q9UKS6 RNU6-40P-201ENST00000384254 107 ntBASIC5.96□□□□□ -1.46
PACSIN3Q9UKS6 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
PACSIN3Q9UKS6 RPL12P23-201ENST00000405880 490 ntBASIC5.96□□□□□ -1.46
PACSIN3Q9UKS6 AJ239321.1-201ENST00000424255 564 ntBASIC5.96□□□□□ -1.46
PACSIN3Q9UKS6 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.96□□□□□ -1.46
PACSIN3Q9UKS6 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.96□□□□□ -1.46
PACSIN3Q9UKS6 RPS3AP38-201ENST00000435889 763 ntBASIC5.96□□□□□ -1.46
PACSIN3Q9UKS6 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.96□□□□□ -1.46
PACSIN3Q9UKS6 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.96□□□□□ -1.46
PACSIN3Q9UKS6 UBBP5-201ENST00000446970 266 ntBASIC5.96□□□□□ -1.46
PACSIN3Q9UKS6 AC019084.1-201ENST00000457337 432 ntBASIC5.96□□□□□ -1.46
PACSIN3Q9UKS6 RPL29P23-201ENST00000486188 442 ntBASIC5.96□□□□□ -1.46
PACSIN3Q9UKS6 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms