Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.73□□□□□ -1.33
CLIP2Q9UDT6 OR5AQ1P-203ENST00000641818 1529 ntBASIC6.73□□□□□ -1.33
CLIP2Q9UDT6 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.73□□□□□ -1.33
CLIP2Q9UDT6 AL596448.1-201ENST00000415024 392 ntBASIC6.73□□□□□ -1.33
CLIP2Q9UDT6 NIFKP3-201ENST00000417799 865 ntBASIC6.73□□□□□ -1.33
CLIP2Q9UDT6 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
CLIP2Q9UDT6 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CLIP2Q9UDT6 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.73□□□□□ -1.33
CLIP2Q9UDT6 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CLIP2Q9UDT6 RN7SL72P-201ENST00000460697 269 ntBASIC6.73□□□□□ -1.33
CLIP2Q9UDT6 AC108751.3-201ENST00000461814 1020 ntBASIC6.73□□□□□ -1.33
CLIP2Q9UDT6 AC006539.1-201ENST00000481419 501 ntBASIC6.73□□□□□ -1.33
CLIP2Q9UDT6 RN7SL466P-201ENST00000497546 295 ntBASIC6.73□□□□□ -1.33
CLIP2Q9UDT6 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.73□□□□□ -1.33
CLIP2Q9UDT6 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CLIP2Q9UDT6 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.73□□□□□ -1.33
CLIP2Q9UDT6 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.73□□□□□ -1.33
CLIP2Q9UDT6 AC090424.1-201ENST00000535243 736 ntBASIC6.73□□□□□ -1.33
CLIP2Q9UDT6 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.73□□□□□ -1.33
CLIP2Q9UDT6 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.73□□□□□ -1.33
CLIP2Q9UDT6 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC6.73□□□□□ -1.33
CLIP2Q9UDT6 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.73□□□□□ -1.33
CLIP2Q9UDT6 AC022467.1-201ENST00000614738 749 ntBASIC6.73□□□□□ -1.33
CLIP2Q9UDT6 RNA5SP439-201ENST00000617595 124 ntBASIC6.73□□□□□ -1.33
CLIP2Q9UDT6 CU639417.4-201ENST00000623928 207 ntBASIC6.73□□□□□ -1.33
CLIP2Q9UDT6 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
CLIP2Q9UDT6 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CLIP2Q9UDT6 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
CLIP2Q9UDT6 AC239868.2-201ENST00000564237 4527 ntBASIC6.73□□□□□ -1.33
CLIP2Q9UDT6 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CLIP2Q9UDT6 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CLIP2Q9UDT6 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CLIP2Q9UDT6 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.73□□□□□ -1.33
CLIP2Q9UDT6 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CLIP2Q9UDT6 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
CLIP2Q9UDT6 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.72□□□□□ -1.33
CLIP2Q9UDT6 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CLIP2Q9UDT6 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
CLIP2Q9UDT6 BX276092.6-201ENST00000430476 250 ntBASIC6.72□□□□□ -1.33
CLIP2Q9UDT6 FMO7P-201ENST00000436045 768 ntBASIC6.72□□□□□ -1.33
CLIP2Q9UDT6 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.72□□□□□ -1.33
CLIP2Q9UDT6 AC096775.1-201ENST00000437724 448 ntBASIC6.72□□□□□ -1.33
CLIP2Q9UDT6 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.72□□□□□ -1.33
CLIP2Q9UDT6 BX276092.8-201ENST00000455722 250 ntBASIC6.72□□□□□ -1.33
CLIP2Q9UDT6 RN7SL570P-201ENST00000484405 292 ntBASIC6.72□□□□□ -1.33
CLIP2Q9UDT6 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.72□□□□□ -1.33
CLIP2Q9UDT6 IGHVIII-67-4-201ENST00000524281 296 ntBASIC6.72□□□□□ -1.33
CLIP2Q9UDT6 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.72□□□□□ -1.33
CLIP2Q9UDT6 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.72□□□□□ -1.33
CLIP2Q9UDT6 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CLIP2Q9UDT6 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CLIP2Q9UDT6 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.72□□□□□ -1.33
CLIP2Q9UDT6 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.72□□□□□ -1.33
CLIP2Q9UDT6 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6.72□□□□□ -1.33
CLIP2Q9UDT6 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CLIP2Q9UDT6 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
CLIP2Q9UDT6 AC114786.1-201ENST00000512892 1415 ntBASIC6.72□□□□□ -1.33
CLIP2Q9UDT6 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CLIP2Q9UDT6 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CLIP2Q9UDT6 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
CLIP2Q9UDT6 LINC02019-201ENST00000608605 2060 ntBASIC6.72□□□□□ -1.33
CLIP2Q9UDT6 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
CLIP2Q9UDT6 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.71□□□□□ -1.33
CLIP2Q9UDT6 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
CLIP2Q9UDT6 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.71□□□□□ -1.33
CLIP2Q9UDT6 MFSD8-239ENST00000641590 2479 ntBASIC6.71□□□□□ -1.33
CLIP2Q9UDT6 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
CLIP2Q9UDT6 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CLIP2Q9UDT6 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.71□□□□□ -1.34
CLIP2Q9UDT6 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CLIP2Q9UDT6 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.71□□□□□ -1.34
CLIP2Q9UDT6 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.71□□□□□ -1.34
CLIP2Q9UDT6 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CLIP2Q9UDT6 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.71□□□□□ -1.34
CLIP2Q9UDT6 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.71□□□□□ -1.34
CLIP2Q9UDT6 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.71□□□□□ -1.34
CLIP2Q9UDT6 AC087672.1-201ENST00000479876 766 ntBASIC6.71□□□□□ -1.34
CLIP2Q9UDT6 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.71□□□□□ -1.34
CLIP2Q9UDT6 AC073610.1-201ENST00000489971 396 ntBASIC6.71□□□□□ -1.34
CLIP2Q9UDT6 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CLIP2Q9UDT6 AC026782.2-201ENST00000510845 636 ntBASIC6.71□□□□□ -1.34
CLIP2Q9UDT6 SCARNA21.2-201ENST00000516600 166 ntBASIC6.71□□□□□ -1.34
CLIP2Q9UDT6 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC6.71□□□□□ -1.34
CLIP2Q9UDT6 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.71□□□□□ -1.34
CLIP2Q9UDT6 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CLIP2Q9UDT6 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.71□□□□□ -1.34
CLIP2Q9UDT6 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.71□□□□□ -1.34
CLIP2Q9UDT6 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.71□□□□□ -1.34
CLIP2Q9UDT6 AL512624.1-201ENST00000613638 469 ntBASIC6.71□□□□□ -1.34
CLIP2Q9UDT6 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.71□□□□□ -1.34
CLIP2Q9UDT6 AC079776.5-201ENST00000641920 211 ntBASIC6.71□□□□□ -1.34
CLIP2Q9UDT6 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CLIP2Q9UDT6 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
CLIP2Q9UDT6 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CLIP2Q9UDT6 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.71□□□□□ -1.34
CLIP2Q9UDT6 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CLIP2Q9UDT6 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CLIP2Q9UDT6 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CLIP2Q9UDT6 AL121839.2-201ENST00000565058 6943 ntBASIC6.71□□□□□ -1.34
CLIP2Q9UDT6 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms