Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
COL20A1Q9P218 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.59□□□□□ -1.35
COL20A1Q9P218 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.59□□□□□ -1.35
COL20A1Q9P218 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
COL20A1Q9P218 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
COL20A1Q9P218 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.59□□□□□ -1.35
COL20A1Q9P218 SNORD115-48-201ENST00000364764 76 ntBASIC6.59□□□□□ -1.35
COL20A1Q9P218 TANK-203ENST00000402568 878 ntTSL 5 BASIC6.59□□□□□ -1.35
COL20A1Q9P218 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.59□□□□□ -1.35
COL20A1Q9P218 AL022331.1-201ENST00000429025 477 ntBASIC6.59□□□□□ -1.35
COL20A1Q9P218 AC015983.1-201ENST00000441577 373 ntBASIC6.59□□□□□ -1.35
COL20A1Q9P218 CYCSP51-201ENST00000443545 318 ntBASIC6.59□□□□□ -1.35
COL20A1Q9P218 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.59□□□□□ -1.35
COL20A1Q9P218 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.59□□□□□ -1.35
COL20A1Q9P218 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC6.59□□□□□ -1.35
COL20A1Q9P218 AP002345.1-201ENST00000456493 928 ntBASIC6.59□□□□□ -1.35
COL20A1Q9P218 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC6.59□□□□□ -1.35
COL20A1Q9P218 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC6.59□□□□□ -1.35
COL20A1Q9P218 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.59□□□□□ -1.35
COL20A1Q9P218 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.59□□□□□ -1.35
COL20A1Q9P218 RPL7L1P4-201ENST00000513004 707 ntBASIC6.59□□□□□ -1.35
COL20A1Q9P218 SCARNA21.2-201ENST00000516600 166 ntBASIC6.59□□□□□ -1.35
COL20A1Q9P218 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.59□□□□□ -1.35
COL20A1Q9P218 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.59□□□□□ -1.35
COL20A1Q9P218 GTF2IP11-201ENST00000526931 420 ntBASIC6.59□□□□□ -1.35
COL20A1Q9P218 HSPE1P2-201ENST00000554777 306 ntBASIC6.59□□□□□ -1.35
COL20A1Q9P218 AL049779.3-201ENST00000557141 606 ntBASIC6.59□□□□□ -1.35
COL20A1Q9P218 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.59□□□□□ -1.35
COL20A1Q9P218 AC126365.2-201ENST00000580630 379 ntBASIC6.59□□□□□ -1.35
COL20A1Q9P218 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.59□□□□□ -1.35
COL20A1Q9P218 AC063977.5-201ENST00000601044 974 ntBASIC6.59□□□□□ -1.35
COL20A1Q9P218 AC242628.1-201ENST00000606810 391 ntBASIC6.59□□□□□ -1.35
COL20A1Q9P218 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC6.59□□□□□ -1.35
COL20A1Q9P218 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
COL20A1Q9P218 AL445493.3-201ENST00000619568 477 ntBASIC6.59□□□□□ -1.35
COL20A1Q9P218 AC022306.3-201ENST00000619930 550 ntBASIC6.59□□□□□ -1.35
COL20A1Q9P218 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
COL20A1Q9P218 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
COL20A1Q9P218 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
COL20A1Q9P218 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
COL20A1Q9P218 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
COL20A1Q9P218 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.59□□□□□ -1.36
COL20A1Q9P218 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
COL20A1Q9P218 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
COL20A1Q9P218 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
COL20A1Q9P218 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.59□□□□□ -1.36
COL20A1Q9P218 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
COL20A1Q9P218 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.59□□□□□ -1.36
COL20A1Q9P218 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
COL20A1Q9P218 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.58□□□□□ -1.36
COL20A1Q9P218 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL20A1Q9P218 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL20A1Q9P218 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.58□□□□□ -1.36
COL20A1Q9P218 CIR1P2-201ENST00000514821 1342 ntBASIC6.58□□□□□ -1.36
COL20A1Q9P218 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL20A1Q9P218 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.58□□□□□ -1.36
COL20A1Q9P218 AL161756.3-201ENST00000641216 2071 ntBASIC6.58□□□□□ -1.36
COL20A1Q9P218 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL20A1Q9P218 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL20A1Q9P218 MIR421-201ENST00000365696 85 ntBASIC6.58□□□□□ -1.36
COL20A1Q9P218 AL391361.1-201ENST00000405580 489 ntBASIC6.58□□□□□ -1.36
COL20A1Q9P218 OR6E1P-201ENST00000414424 923 ntBASIC6.58□□□□□ -1.36
COL20A1Q9P218 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC6.58□□□□□ -1.36
COL20A1Q9P218 ELOCP6-201ENST00000429066 328 ntBASIC6.58□□□□□ -1.36
COL20A1Q9P218 FMO7P-201ENST00000436045 768 ntBASIC6.58□□□□□ -1.36
COL20A1Q9P218 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL20A1Q9P218 AC005297.1-201ENST00000444765 862 ntBASIC6.58□□□□□ -1.36
COL20A1Q9P218 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC6.58□□□□□ -1.36
COL20A1Q9P218 AL445687.2-201ENST00000458156 728 ntBASIC6.58□□□□□ -1.36
COL20A1Q9P218 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.58□□□□□ -1.36
COL20A1Q9P218 ELOCP12-201ENST00000458706 328 ntBASIC6.58□□□□□ -1.36
COL20A1Q9P218 STRADBP1-201ENST00000478954 1281 ntBASIC6.58□□□□□ -1.36
COL20A1Q9P218 AC073610.1-201ENST00000489971 396 ntBASIC6.58□□□□□ -1.36
COL20A1Q9P218 OR7E157P-201ENST00000494376 911 ntBASIC6.58□□□□□ -1.36
COL20A1Q9P218 RN7SL466P-201ENST00000497546 295 ntBASIC6.58□□□□□ -1.36
COL20A1Q9P218 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL20A1Q9P218 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL20A1Q9P218 ATP5LP3-201ENST00000514223 304 ntBASIC6.58□□□□□ -1.36
COL20A1Q9P218 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC6.58□□□□□ -1.36
COL20A1Q9P218 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL20A1Q9P218 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC6.58□□□□□ -1.36
COL20A1Q9P218 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.58□□□□□ -1.36
COL20A1Q9P218 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC6.58□□□□□ -1.36
COL20A1Q9P218 AC079148.1-201ENST00000565944 819 ntBASIC6.58□□□□□ -1.36
COL20A1Q9P218 KATNBL1P5-201ENST00000605015 517 ntBASIC6.58□□□□□ -1.36
COL20A1Q9P218 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6.58□□□□□ -1.36
COL20A1Q9P218 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL20A1Q9P218 AL355802.4-201ENST00000607635 548 ntBASIC6.58□□□□□ -1.36
COL20A1Q9P218 OR51C1P-201ENST00000608504 942 ntBASIC6.58□□□□□ -1.36
COL20A1Q9P218 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL20A1Q9P218 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.58□□□□□ -1.36
COL20A1Q9P218 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL20A1Q9P218 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.58□□□□□ -1.36
COL20A1Q9P218 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
COL20A1Q9P218 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
COL20A1Q9P218 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.58□□□□□ -1.36
COL20A1Q9P218 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL20A1Q9P218 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL20A1Q9P218 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL20A1Q9P218 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms