Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 AP004372.1-201ENST00000604842 844 ntBASIC7.69□□□□□ -1.18
CHMP4AQ9BY43 AL139099.4-201ENST00000614802 114 ntBASIC7.69□□□□□ -1.18
CHMP4AQ9BY43 AL445670.1-201ENST00000618889 801 ntBASIC7.69□□□□□ -1.18
CHMP4AQ9BY43 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CHMP4AQ9BY43 AC021106.3-201ENST00000623925 531 ntBASIC7.69□□□□□ -1.18
CHMP4AQ9BY43 AP003499.2-201ENST00000624100 483 ntBASIC7.69□□□□□ -1.18
CHMP4AQ9BY43 AP002967.1-201ENST00000624203 539 ntBASIC7.69□□□□□ -1.18
CHMP4AQ9BY43 AC129915.3-201ENST00000634128 948 ntBASIC7.69□□□□□ -1.18
CHMP4AQ9BY43 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CHMP4AQ9BY43 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CHMP4AQ9BY43 HSPA8P17-201ENST00000427029 1382 ntBASIC7.69□□□□□ -1.18
CHMP4AQ9BY43 AP005435.3-201ENST00000531260 3198 ntBASIC7.69□□□□□ -1.18
CHMP4AQ9BY43 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CHMP4AQ9BY43 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
CHMP4AQ9BY43 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CHMP4AQ9BY43 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC7.68□□□□□ -1.18
CHMP4AQ9BY43 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC7.68□□□□□ -1.18
CHMP4AQ9BY43 SELENOWP1-201ENST00000322792 252 ntBASIC7.68□□□□□ -1.18
CHMP4AQ9BY43 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CHMP4AQ9BY43 AL451142.1-201ENST00000375867 775 ntBASIC7.68□□□□□ -1.18
CHMP4AQ9BY43 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC7.68□□□□□ -1.18
CHMP4AQ9BY43 RNU1-74P-201ENST00000384108 171 ntBASIC7.68□□□□□ -1.18
CHMP4AQ9BY43 AL360271.1-201ENST00000395679 510 ntBASIC7.68□□□□□ -1.18
CHMP4AQ9BY43 RNU6-564P-201ENST00000410983 104 ntBASIC7.68□□□□□ -1.18
CHMP4AQ9BY43 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC7.68□□□□□ -1.18
CHMP4AQ9BY43 AL445928.1-201ENST00000435545 222 ntBASIC7.68□□□□□ -1.18
CHMP4AQ9BY43 CUBNP2-201ENST00000443534 1139 ntBASIC7.68□□□□□ -1.18
CHMP4AQ9BY43 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC7.68□□□□□ -1.18
CHMP4AQ9BY43 AL591623.2-201ENST00000449978 222 ntBASIC7.68□□□□□ -1.18
CHMP4AQ9BY43 AC084754.1-201ENST00000463466 464 ntBASIC7.68□□□□□ -1.18
CHMP4AQ9BY43 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CHMP4AQ9BY43 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC7.68□□□□□ -1.18
CHMP4AQ9BY43 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC7.68□□□□□ -1.18
CHMP4AQ9BY43 OR4V1P-201ENST00000525394 1140 ntBASIC7.68□□□□□ -1.18
CHMP4AQ9BY43 PCNAP4-201ENST00000532690 730 ntBASIC7.68□□□□□ -1.18
CHMP4AQ9BY43 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC7.68□□□□□ -1.18
CHMP4AQ9BY43 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC7.68□□□□□ -1.18
CHMP4AQ9BY43 AC009268.1-201ENST00000561352 1203 ntBASIC7.68□□□□□ -1.18
CHMP4AQ9BY43 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC7.68□□□□□ -1.18
CHMP4AQ9BY43 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC7.68□□□□□ -1.18
CHMP4AQ9BY43 AC022387.2-201ENST00000604050 448 ntBASIC7.68□□□□□ -1.18
CHMP4AQ9BY43 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CHMP4AQ9BY43 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC7.68□□□□□ -1.18
CHMP4AQ9BY43 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC7.68□□□□□ -1.18
CHMP4AQ9BY43 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC7.68□□□□□ -1.18
CHMP4AQ9BY43 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CHMP4AQ9BY43 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC7.68□□□□□ -1.18
CHMP4AQ9BY43 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
CHMP4AQ9BY43 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CHMP4AQ9BY43 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC7.68□□□□□ -1.18
CHMP4AQ9BY43 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CHMP4AQ9BY43 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
CHMP4AQ9BY43 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CHMP4AQ9BY43 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
CHMP4AQ9BY43 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CHMP4AQ9BY43 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
CHMP4AQ9BY43 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
CHMP4AQ9BY43 AL445437.1-201ENST00000623157 3087 ntBASIC7.67□□□□□ -1.18
CHMP4AQ9BY43 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC7.67□□□□□ -1.18
CHMP4AQ9BY43 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
CHMP4AQ9BY43 RNA5SP273-201ENST00000362484 113 ntBASIC7.67□□□□□ -1.18
CHMP4AQ9BY43 AC233289.1-201ENST00000403700 508 ntBASIC7.67□□□□□ -1.18
CHMP4AQ9BY43 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC7.67□□□□□ -1.18
CHMP4AQ9BY43 NENFP1-201ENST00000419476 466 ntBASIC7.67□□□□□ -1.18
CHMP4AQ9BY43 GNG5P5-201ENST00000420444 220 ntBASIC7.67□□□□□ -1.18
CHMP4AQ9BY43 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC7.67□□□□□ -1.18
CHMP4AQ9BY43 RPS7P3-201ENST00000443360 580 ntBASIC7.67□□□□□ -1.18
CHMP4AQ9BY43 TXNP2-201ENST00000443918 295 ntBASIC7.67□□□□□ -1.18
CHMP4AQ9BY43 NPM1P19-201ENST00000450070 712 ntBASIC7.67□□□□□ -1.18
CHMP4AQ9BY43 AL162739.1-201ENST00000450606 307 ntBASIC7.67□□□□□ -1.18
CHMP4AQ9BY43 AC144530.1-201ENST00000452862 555 ntBASIC7.67□□□□□ -1.18
CHMP4AQ9BY43 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC7.67□□□□□ -1.18
CHMP4AQ9BY43 AC037198.2-201ENST00000478845 733 ntBASIC7.67□□□□□ -1.18
CHMP4AQ9BY43 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
CHMP4AQ9BY43 AC008629.2-201ENST00000503783 483 ntBASIC7.67□□□□□ -1.18
CHMP4AQ9BY43 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC7.67□□□□□ -1.18
CHMP4AQ9BY43 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CHMP4AQ9BY43 Y_RNA.667-201ENST00000516212 107 ntBASIC7.67□□□□□ -1.18
CHMP4AQ9BY43 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC7.67□□□□□ -1.18
CHMP4AQ9BY43 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC7.67□□□□□ -1.18
CHMP4AQ9BY43 OR4A6P-201ENST00000534364 970 ntBASIC7.67□□□□□ -1.18
CHMP4AQ9BY43 AC079600.1-201ENST00000550326 297 ntBASIC7.67□□□□□ -1.18
CHMP4AQ9BY43 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
CHMP4AQ9BY43 AL049779.3-201ENST00000557141 606 ntBASIC7.67□□□□□ -1.18
CHMP4AQ9BY43 AL356801.1-201ENST00000559320 294 ntBASIC7.67□□□□□ -1.18
CHMP4AQ9BY43 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC7.67□□□□□ -1.18
CHMP4AQ9BY43 MTCO2P22-201ENST00000603246 681 ntBASIC7.67□□□□□ -1.18
CHMP4AQ9BY43 HMGB1P51-201ENST00000605166 638 ntBASIC7.67□□□□□ -1.18
CHMP4AQ9BY43 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC7.67□□□□□ -1.18
CHMP4AQ9BY43 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
CHMP4AQ9BY43 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC7.67□□□□□ -1.18
CHMP4AQ9BY43 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
CHMP4AQ9BY43 AC007342.9-201ENST00000623877 1385 ntBASIC7.67□□□□□ -1.18
CHMP4AQ9BY43 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
CHMP4AQ9BY43 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
CHMP4AQ9BY43 IARS-213ENST00000627121 4587 ntTSL 5 BASIC7.67□□□□□ -1.18
CHMP4AQ9BY43 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC7.67□□□□□ -1.18
CHMP4AQ9BY43 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CHMP4AQ9BY43 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC7.67□□□□□ -1.18
CHMP4AQ9BY43 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms