Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 METTL8-219ENST00000640734 726 ntTSL 2 BASIC5.72□□□□□ -1.49
SNX18Q96RF0 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
SNX18Q96RF0 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.72□□□□□ -1.49
SNX18Q96RF0 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SNX18Q96RF0 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SNX18Q96RF0 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SNX18Q96RF0 AC119674.1-202ENST00000641333 1860 ntBASIC5.72□□□□□ -1.49
SNX18Q96RF0 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SNX18Q96RF0 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.72□□□□□ -1.49
SNX18Q96RF0 ADAM24P-201ENST00000398655 2101 ntBASIC5.72□□□□□ -1.49
SNX18Q96RF0 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SNX18Q96RF0 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SNX18Q96RF0 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.72□□□□□ -1.49
SNX18Q96RF0 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
SNX18Q96RF0 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SNX18Q96RF0 AP001284.1-201ENST00000528393 2118 ntBASIC5.71□□□□□ -1.5
SNX18Q96RF0 AC005261.2-201ENST00000593427 4258 ntBASIC5.71□□□□□ -1.5
SNX18Q96RF0 BIN2P1-201ENST00000504996 1530 ntBASIC5.71□□□□□ -1.5
SNX18Q96RF0 AC090181.3-201ENST00000624777 1514 ntBASIC5.71□□□□□ -1.5
SNX18Q96RF0 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
SNX18Q96RF0 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC5.71□□□□□ -1.5
SNX18Q96RF0 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SNX18Q96RF0 SNORD16-201ENST00000362803 99 ntBASIC5.71□□□□□ -1.5
SNX18Q96RF0 RNU5E-10P-201ENST00000363506 118 ntBASIC5.71□□□□□ -1.5
SNX18Q96RF0 RN7SKP250-201ENST00000363924 321 ntBASIC5.71□□□□□ -1.5
SNX18Q96RF0 RNU4-40P-201ENST00000364351 143 ntBASIC5.71□□□□□ -1.5
SNX18Q96RF0 MIR621-201ENST00000384919 96 ntBASIC5.71□□□□□ -1.5
SNX18Q96RF0 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SNX18Q96RF0 AP002530.1-201ENST00000405705 684 ntBASIC5.71□□□□□ -1.5
SNX18Q96RF0 BX664727.1-201ENST00000416024 466 ntBASIC5.71□□□□□ -1.5
SNX18Q96RF0 AL158827.1-201ENST00000416300 391 ntBASIC5.71□□□□□ -1.5
SNX18Q96RF0 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SNX18Q96RF0 NANOGP9-201ENST00000439890 892 ntBASIC5.71□□□□□ -1.5
SNX18Q96RF0 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC5.71□□□□□ -1.5
SNX18Q96RF0 COL11A2P1-205ENST00000441798 676 ntBASIC5.71□□□□□ -1.5
SNX18Q96RF0 AC079922.1-201ENST00000443291 359 ntBASIC5.71□□□□□ -1.5
SNX18Q96RF0 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.71□□□□□ -1.5
SNX18Q96RF0 Z77249.1-201ENST00000444622 1175 ntBASIC5.71□□□□□ -1.5
SNX18Q96RF0 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SNX18Q96RF0 AC234771.2-201ENST00000445718 597 ntBASIC5.71□□□□□ -1.5
SNX18Q96RF0 EXOSC3P1-201ENST00000448649 500 ntBASIC5.71□□□□□ -1.5
SNX18Q96RF0 RPL7P55-201ENST00000450522 746 ntBASIC5.71□□□□□ -1.5
SNX18Q96RF0 AC103563.5-201ENST00000455643 364 ntBASIC5.71□□□□□ -1.5
SNX18Q96RF0 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SNX18Q96RF0 AC096992.1-201ENST00000459808 709 ntBASIC5.71□□□□□ -1.5
SNX18Q96RF0 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.71□□□□□ -1.5
SNX18Q96RF0 AC020898.1-201ENST00000474167 787 ntBASIC5.71□□□□□ -1.5
SNX18Q96RF0 SETP6-201ENST00000479329 568 ntBASIC5.71□□□□□ -1.5
SNX18Q96RF0 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
SNX18Q96RF0 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.71□□□□□ -1.5
SNX18Q96RF0 AC020699.1-201ENST00000505161 445 ntBASIC5.71□□□□□ -1.5
SNX18Q96RF0 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.71□□□□□ -1.5
SNX18Q96RF0 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.71□□□□□ -1.5
SNX18Q96RF0 AC010376.1-201ENST00000522101 334 ntBASIC5.71□□□□□ -1.5
SNX18Q96RF0 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.71□□□□□ -1.5
SNX18Q96RF0 AC023538.1-201ENST00000534576 736 ntBASIC5.71□□□□□ -1.5
SNX18Q96RF0 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.71□□□□□ -1.5
SNX18Q96RF0 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC5.71□□□□□ -1.5
SNX18Q96RF0 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC5.71□□□□□ -1.5
SNX18Q96RF0 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
SNX18Q96RF0 AC025918.2-201ENST00000558683 763 ntBASIC5.71□□□□□ -1.5
SNX18Q96RF0 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC5.71□□□□□ -1.5
SNX18Q96RF0 AGGF1P9-201ENST00000561884 913 ntBASIC5.71□□□□□ -1.5
SNX18Q96RF0 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.71□□□□□ -1.5
SNX18Q96RF0 AC092718.4-201ENST00000566639 716 ntBASIC5.71□□□□□ -1.5
SNX18Q96RF0 AC023825.1-201ENST00000566704 1030 ntBASIC5.71□□□□□ -1.5
SNX18Q96RF0 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SNX18Q96RF0 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.71□□□□□ -1.5
SNX18Q96RF0 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.71□□□□□ -1.5
SNX18Q96RF0 EIF1P5-201ENST00000585002 234 ntBASIC5.71□□□□□ -1.5
SNX18Q96RF0 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.71□□□□□ -1.5
SNX18Q96RF0 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.71□□□□□ -1.5
SNX18Q96RF0 AC010487.1-201ENST00000594408 1172 ntBASIC5.71□□□□□ -1.5
SNX18Q96RF0 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.71□□□□□ -1.5
SNX18Q96RF0 AC011500.1-201ENST00000601963 469 ntBASIC5.71□□□□□ -1.5
SNX18Q96RF0 AC114878.2-201ENST00000604863 1251 ntBASIC5.71□□□□□ -1.5
SNX18Q96RF0 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.71□□□□□ -1.5
SNX18Q96RF0 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.71□□□□□ -1.5
SNX18Q96RF0 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.71□□□□□ -1.5
SNX18Q96RF0 CYCSP41-201ENST00000616920 296 ntBASIC5.71□□□□□ -1.5
SNX18Q96RF0 RMST_5.1-201ENST00000618704 126 ntBASIC5.71□□□□□ -1.5
SNX18Q96RF0 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.71□□□□□ -1.5
SNX18Q96RF0 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SNX18Q96RF0 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SNX18Q96RF0 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.71□□□□□ -1.5
SNX18Q96RF0 LINC02019-201ENST00000608605 2060 ntBASIC5.71□□□□□ -1.5
SNX18Q96RF0 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.71□□□□□ -1.5
SNX18Q96RF0 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SNX18Q96RF0 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.71□□□□□ -1.5
SNX18Q96RF0 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SNX18Q96RF0 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SNX18Q96RF0 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SNX18Q96RF0 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.71□□□□□ -1.5
SNX18Q96RF0 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
SNX18Q96RF0 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SNX18Q96RF0 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SNX18Q96RF0 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SNX18Q96RF0 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SNX18Q96RF0 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SNX18Q96RF0 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms