Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 DPPA2P2-201ENST00000418220 897 ntBASIC6.2□□□□□ -1.42
CCDC112Q8NEF3 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.2□□□□□ -1.42
CCDC112Q8NEF3 REREP1Y-201ENST00000422655 198 ntBASIC6.2□□□□□ -1.42
CCDC112Q8NEF3 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.2□□□□□ -1.42
CCDC112Q8NEF3 AL389925.1-201ENST00000432257 728 ntBASIC6.2□□□□□ -1.42
CCDC112Q8NEF3 REREP2Y-201ENST00000439103 200 ntBASIC6.2□□□□□ -1.42
CCDC112Q8NEF3 HMGN1P2-201ENST00000445197 310 ntBASIC6.2□□□□□ -1.42
CCDC112Q8NEF3 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.2□□□□□ -1.42
CCDC112Q8NEF3 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC6.2□□□□□ -1.42
CCDC112Q8NEF3 NXT1P1-201ENST00000458481 316 ntBASIC6.2□□□□□ -1.42
CCDC112Q8NEF3 AC092865.4-201ENST00000477936 615 ntBASIC6.2□□□□□ -1.42
CCDC112Q8NEF3 RPL12P30-201ENST00000488389 499 ntBASIC6.2□□□□□ -1.42
CCDC112Q8NEF3 DUTP1-201ENST00000493631 470 ntBASIC6.2□□□□□ -1.42
CCDC112Q8NEF3 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.2□□□□□ -1.42
CCDC112Q8NEF3 UGT2A3P7-201ENST00000510485 734 ntBASIC6.2□□□□□ -1.42
CCDC112Q8NEF3 AC021193.1-201ENST00000511607 420 ntBASIC6.2□□□□□ -1.42
CCDC112Q8NEF3 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC112Q8NEF3 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.2□□□□□ -1.42
CCDC112Q8NEF3 AC079064.1-201ENST00000528365 362 ntBASIC6.2□□□□□ -1.42
CCDC112Q8NEF3 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.2□□□□□ -1.42
CCDC112Q8NEF3 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.2□□□□□ -1.42
CCDC112Q8NEF3 AC091078.2-201ENST00000557145 559 ntBASIC6.2□□□□□ -1.42
CCDC112Q8NEF3 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.2□□□□□ -1.42
CCDC112Q8NEF3 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.2□□□□□ -1.42
CCDC112Q8NEF3 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC6.2□□□□□ -1.42
CCDC112Q8NEF3 AL080312.2-201ENST00000613001 630 ntBASIC6.2□□□□□ -1.42
CCDC112Q8NEF3 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.2□□□□□ -1.42
CCDC112Q8NEF3 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CCDC112Q8NEF3 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC112Q8NEF3 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC112Q8NEF3 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC112Q8NEF3 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC6.2□□□□□ -1.42
CCDC112Q8NEF3 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC112Q8NEF3 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC112Q8NEF3 AL442128.2-201ENST00000620246 1824 ntBASIC6.2□□□□□ -1.42
CCDC112Q8NEF3 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
CCDC112Q8NEF3 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.19□□□□□ -1.42
CCDC112Q8NEF3 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC112Q8NEF3 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.19□□□□□ -1.42
CCDC112Q8NEF3 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC112Q8NEF3 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.19□□□□□ -1.42
CCDC112Q8NEF3 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC6.19□□□□□ -1.42
CCDC112Q8NEF3 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.19□□□□□ -1.42
CCDC112Q8NEF3 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CCDC112Q8NEF3 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.19□□□□□ -1.42
CCDC112Q8NEF3 RN7SKP77-201ENST00000363261 353 ntBASIC6.19□□□□□ -1.42
CCDC112Q8NEF3 RNA5SP122-201ENST00000384457 108 ntBASIC6.19□□□□□ -1.42
CCDC112Q8NEF3 AC016739.1-201ENST00000405359 345 ntBASIC6.19□□□□□ -1.42
CCDC112Q8NEF3 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.19□□□□□ -1.42
CCDC112Q8NEF3 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC6.19□□□□□ -1.42
CCDC112Q8NEF3 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC6.19□□□□□ -1.42
CCDC112Q8NEF3 RPL6P30-201ENST00000443382 862 ntBASIC6.19□□□□□ -1.42
CCDC112Q8NEF3 OR52E3P-201ENST00000452083 936 ntBASIC6.19□□□□□ -1.42
CCDC112Q8NEF3 NDUFA5P5-201ENST00000468361 342 ntBASIC6.19□□□□□ -1.42
CCDC112Q8NEF3 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.19□□□□□ -1.42
CCDC112Q8NEF3 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.19□□□□□ -1.42
CCDC112Q8NEF3 AC074255.1-201ENST00000511259 501 ntBASIC6.19□□□□□ -1.42
CCDC112Q8NEF3 AC098976.1-201ENST00000513014 541 ntBASIC6.19□□□□□ -1.42
CCDC112Q8NEF3 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC6.19□□□□□ -1.42
CCDC112Q8NEF3 IGKV2-4-201ENST00000523070 340 ntBASIC6.19□□□□□ -1.42
CCDC112Q8NEF3 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.19□□□□□ -1.42
CCDC112Q8NEF3 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.19□□□□□ -1.42
CCDC112Q8NEF3 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.19□□□□□ -1.42
CCDC112Q8NEF3 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC6.19□□□□□ -1.42
CCDC112Q8NEF3 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.19□□□□□ -1.42
CCDC112Q8NEF3 AC004232.2-201ENST00000574245 821 ntBASIC6.19□□□□□ -1.42
CCDC112Q8NEF3 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.19□□□□□ -1.42
CCDC112Q8NEF3 AC127024.5-201ENST00000580085 462 ntBASIC6.19□□□□□ -1.42
CCDC112Q8NEF3 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.19□□□□□ -1.42
CCDC112Q8NEF3 AL138895.2-201ENST00000603019 178 ntBASIC6.19□□□□□ -1.42
CCDC112Q8NEF3 AC015982.1-201ENST00000608113 465 ntBASIC6.19□□□□□ -1.42
CCDC112Q8NEF3 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
CCDC112Q8NEF3 AL512652.1-201ENST00000619006 500 ntBASIC6.19□□□□□ -1.42
CCDC112Q8NEF3 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC6.19□□□□□ -1.42
CCDC112Q8NEF3 OR11H2-202ENST00000641517 1085 ntBASIC6.19□□□□□ -1.42
CCDC112Q8NEF3 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC112Q8NEF3 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC112Q8NEF3 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.19□□□□□ -1.42
CCDC112Q8NEF3 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CCDC112Q8NEF3 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC112Q8NEF3 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
CCDC112Q8NEF3 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
CCDC112Q8NEF3 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CCDC112Q8NEF3 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CCDC112Q8NEF3 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC112Q8NEF3 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.18□□□□□ -1.42
CCDC112Q8NEF3 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
CCDC112Q8NEF3 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
CCDC112Q8NEF3 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC112Q8NEF3 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
CCDC112Q8NEF3 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC6.18□□□□□ -1.42
CCDC112Q8NEF3 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CCDC112Q8NEF3 RN7SKP269-201ENST00000365545 319 ntBASIC6.18□□□□□ -1.42
CCDC112Q8NEF3 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC112Q8NEF3 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
CCDC112Q8NEF3 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC112Q8NEF3 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC112Q8NEF3 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.18□□□□□ -1.42
CCDC112Q8NEF3 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC112Q8NEF3 CYCSP51-201ENST00000443545 318 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms