Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 RNU6-670P-201ENST00000364312 104 ntBASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 RNA5SP279-201ENST00000365513 117 ntBASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 RNA5SP211-201ENST00000365516 117 ntBASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 SNRPEP6-201ENST00000407465 277 ntBASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 RPS12P17-201ENST00000438591 377 ntBASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 KRT8P51-201ENST00000438938 274 ntBASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 C1DP3-201ENST00000455013 423 ntBASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 FCF1P6-201ENST00000456841 595 ntBASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 EIF2S2P4-201ENST00000461070 984 ntBASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 RN7SL362P-201ENST00000494228 267 ntBASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 AC112484.3-201ENST00000505910 329 ntBASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 AC108103.1-201ENST00000511286 446 ntBASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 NPM1P21-201ENST00000513394 762 ntBASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 MAST4-IT1-201ENST00000514241 658 ntBASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 AC110760.3-202ENST00000515177 371 ntBASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 SCARNA1-201ENST00000517138 166 ntBASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 AC007346.2-201ENST00000564816 892 ntBASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 AC007346.1-201ENST00000569208 867 ntBASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 AC027216.1-201ENST00000577726 685 ntBASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 ARGFXP2-201ENST00000579304 949 ntBASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 AC011500.1-201ENST00000601963 469 ntBASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 AL671309.1-201ENST00000603750 544 ntBASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 AC073111.2-201ENST00000605657 1075 ntBASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 AC018645.2-201ENST00000609151 472 ntBASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 AC092681.3-201ENST00000609463 678 ntBASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 AC104763.3-201ENST00000613765 618 ntBASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 uc_338.31-201ENST00000615595 186 ntBASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 MIR6721-201ENST00000617181 87 ntBASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 AC009269.6-201ENST00000621778 588 ntBASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 AC073488.3-201ENST00000631611 778 ntBASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 AL357140.4-201ENST00000636827 412 ntBASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 HSPA8P19-201ENST00000505359 1517 ntBASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 MTCO1P28-201ENST00000574177 1528 ntBASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLIP4Q8N3C7 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 AP001029.2-203ENST00000589795 4910 ntBASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 Y_RNA.62-201ENST00000362840 99 ntBASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 RN7SKP250-201ENST00000363924 321 ntBASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 AL589994.1-201ENST00000404962 340 ntBASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 HMGN2P27-201ENST00000427352 270 ntBASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 MTND4LP14-201ENST00000429447 288 ntBASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 AC099670.2-201ENST00000435130 321 ntBASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 AL353662.1-201ENST00000439099 327 ntBASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 AL606490.8-201ENST00000441624 319 ntBASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 TRIM60P16-201ENST00000444048 694 ntBASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 MORF4L1P4-201ENST00000450245 976 ntBASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 AC073476.1-201ENST00000452854 407 ntBASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 TVP23BP2-201ENST00000455082 615 ntBASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 MTND2P30-201ENST00000456663 382 ntBASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 PFN1P6-201ENST00000476786 399 ntBASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 AC098818.1-201ENST00000478593 252 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms