Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.75□□□□□ -1.49
CDKL3Q8IVW4 AC087672.1-201ENST00000479876 766 ntBASIC5.75□□□□□ -1.49
CDKL3Q8IVW4 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.75□□□□□ -1.49
CDKL3Q8IVW4 RNA5SP473-201ENST00000516402 125 ntBASIC5.75□□□□□ -1.49
CDKL3Q8IVW4 TRIM77BP-201ENST00000524985 1119 ntBASIC5.75□□□□□ -1.49
CDKL3Q8IVW4 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.75□□□□□ -1.49
CDKL3Q8IVW4 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.75□□□□□ -1.49
CDKL3Q8IVW4 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.75□□□□□ -1.49
CDKL3Q8IVW4 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.75□□□□□ -1.49
CDKL3Q8IVW4 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.75□□□□□ -1.49
CDKL3Q8IVW4 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.75□□□□□ -1.49
CDKL3Q8IVW4 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.75□□□□□ -1.49
CDKL3Q8IVW4 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.75□□□□□ -1.49
CDKL3Q8IVW4 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CDKL3Q8IVW4 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.75□□□□□ -1.49
CDKL3Q8IVW4 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDKL3Q8IVW4 MT-RNR2-201ENST00000387347 1559 ntBASIC5.75□□□□□ -1.49
CDKL3Q8IVW4 AC104964.3-201ENST00000606115 2860 ntBASIC5.75□□□□□ -1.49
CDKL3Q8IVW4 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDKL3Q8IVW4 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.75□□□□□ -1.49
CDKL3Q8IVW4 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDKL3Q8IVW4 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDKL3Q8IVW4 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.75□□□□□ -1.49
CDKL3Q8IVW4 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDKL3Q8IVW4 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
CDKL3Q8IVW4 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDKL3Q8IVW4 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDKL3Q8IVW4 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
CDKL3Q8IVW4 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDKL3Q8IVW4 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.74□□□□□ -1.49
CDKL3Q8IVW4 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDKL3Q8IVW4 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDKL3Q8IVW4 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDKL3Q8IVW4 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDKL3Q8IVW4 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDKL3Q8IVW4 AC107977.1-201ENST00000355745 939 ntBASIC5.74□□□□□ -1.49
CDKL3Q8IVW4 AL009179.1-201ENST00000406085 265 ntBASIC5.74□□□□□ -1.49
CDKL3Q8IVW4 RPS3AP2-201ENST00000407190 754 ntBASIC5.74□□□□□ -1.49
CDKL3Q8IVW4 RMRPP5-201ENST00000411156 267 ntBASIC5.74□□□□□ -1.49
CDKL3Q8IVW4 AL354766.1-201ENST00000423396 542 ntBASIC5.74□□□□□ -1.49
CDKL3Q8IVW4 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.74□□□□□ -1.49
CDKL3Q8IVW4 GAPDHP34-201ENST00000432112 823 ntBASIC5.74□□□□□ -1.49
CDKL3Q8IVW4 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDKL3Q8IVW4 AC073465.2-201ENST00000440938 498 ntBASIC5.74□□□□□ -1.49
CDKL3Q8IVW4 HLA-DPA3-207ENST00000454398 229 ntBASIC5.74□□□□□ -1.49
CDKL3Q8IVW4 RN7SL168P-201ENST00000463821 279 ntBASIC5.74□□□□□ -1.49
CDKL3Q8IVW4 RPS23P6-201ENST00000466136 431 ntBASIC5.74□□□□□ -1.49
CDKL3Q8IVW4 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.74□□□□□ -1.49
CDKL3Q8IVW4 RPL37P23-201ENST00000492641 294 ntBASIC5.74□□□□□ -1.49
CDKL3Q8IVW4 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.74□□□□□ -1.49
CDKL3Q8IVW4 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.74□□□□□ -1.49
CDKL3Q8IVW4 AC024405.1-201ENST00000532521 1042 ntBASIC5.74□□□□□ -1.49
CDKL3Q8IVW4 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.74□□□□□ -1.49
CDKL3Q8IVW4 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.74□□□□□ -1.49
CDKL3Q8IVW4 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.74□□□□□ -1.49
CDKL3Q8IVW4 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.74□□□□□ -1.49
CDKL3Q8IVW4 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.74□□□□□ -1.49
CDKL3Q8IVW4 AC067773.1-201ENST00000603284 1094 ntBASIC5.74□□□□□ -1.49
CDKL3Q8IVW4 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
CDKL3Q8IVW4 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDKL3Q8IVW4 AC006206.1-201ENST00000544842 3387 ntBASIC5.74□□□□□ -1.49
CDKL3Q8IVW4 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDKL3Q8IVW4 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDKL3Q8IVW4 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.74□□□□□ -1.49
CDKL3Q8IVW4 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDKL3Q8IVW4 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDKL3Q8IVW4 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.74□□□□□ -1.49
CDKL3Q8IVW4 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDKL3Q8IVW4 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDKL3Q8IVW4 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.73□□□□□ -1.49
CDKL3Q8IVW4 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
CDKL3Q8IVW4 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
CDKL3Q8IVW4 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDKL3Q8IVW4 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDKL3Q8IVW4 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDKL3Q8IVW4 AC068870.3-201ENST00000625077 2536 ntBASIC5.73□□□□□ -1.49
CDKL3Q8IVW4 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CDKL3Q8IVW4 MIR375-201ENST00000362103 64 ntBASIC5.73□□□□□ -1.49
CDKL3Q8IVW4 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.73□□□□□ -1.49
CDKL3Q8IVW4 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.73□□□□□ -1.49
CDKL3Q8IVW4 AC009784.1-201ENST00000426484 460 ntBASIC5.73□□□□□ -1.49
CDKL3Q8IVW4 NDUFB4P8-201ENST00000435351 367 ntBASIC5.73□□□□□ -1.49
CDKL3Q8IVW4 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.73□□□□□ -1.49
CDKL3Q8IVW4 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.73□□□□□ -1.49
CDKL3Q8IVW4 AP006222.1-205ENST00000450734 457 ntBASIC5.73□□□□□ -1.49
CDKL3Q8IVW4 AC105420.1-201ENST00000504389 582 ntBASIC5.73□□□□□ -1.49
CDKL3Q8IVW4 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
CDKL3Q8IVW4 MRPS16P1-201ENST00000523462 412 ntBASIC5.73□□□□□ -1.49
CDKL3Q8IVW4 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.73□□□□□ -1.49
CDKL3Q8IVW4 AC027026.1-201ENST00000532323 742 ntBASIC5.73□□□□□ -1.49
CDKL3Q8IVW4 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDKL3Q8IVW4 DPPA2P4-201ENST00000563717 878 ntBASIC5.73□□□□□ -1.49
CDKL3Q8IVW4 MIR4271-201ENST00000582451 67 ntBASIC5.73□□□□□ -1.49
CDKL3Q8IVW4 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDKL3Q8IVW4 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.73□□□□□ -1.49
CDKL3Q8IVW4 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.73□□□□□ -1.49
CDKL3Q8IVW4 AC007842.1-201ENST00000597336 2039 ntBASIC5.73□□□□□ -1.49
CDKL3Q8IVW4 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
CDKL3Q8IVW4 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDKL3Q8IVW4 AC144833.1-201ENST00000567953 4089 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 183.9 ms