Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 DNM1P47-203ENST00000571780 12667 ntBASIC6.19□□□□□ -1.42
USP41Q3LFD5 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
USP41Q3LFD5 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.19□□□□□ -1.42
USP41Q3LFD5 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
USP41Q3LFD5 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC6.18□□□□□ -1.42
USP41Q3LFD5 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
USP41Q3LFD5 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
USP41Q3LFD5 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.18□□□□□ -1.42
USP41Q3LFD5 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
USP41Q3LFD5 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
USP41Q3LFD5 YES1P1-201ENST00000418510 1628 ntBASIC6.18□□□□□ -1.42
USP41Q3LFD5 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
USP41Q3LFD5 AL591135.1-201ENST00000401578 5914 ntBASIC6.18□□□□□ -1.42
USP41Q3LFD5 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.18□□□□□ -1.42
USP41Q3LFD5 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.18□□□□□ -1.42
USP41Q3LFD5 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.18□□□□□ -1.42
USP41Q3LFD5 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
USP41Q3LFD5 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
USP41Q3LFD5 AL137141.1-201ENST00000624622 4836 ntBASIC6.18□□□□□ -1.42
USP41Q3LFD5 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
USP41Q3LFD5 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
USP41Q3LFD5 AC113412.1-201ENST00000425840 504 ntBASIC6.18□□□□□ -1.42
USP41Q3LFD5 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.18□□□□□ -1.42
USP41Q3LFD5 SPRYD7P1-201ENST00000443861 570 ntBASIC6.18□□□□□ -1.42
USP41Q3LFD5 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
USP41Q3LFD5 MTND3P4-201ENST00000453537 303 ntBASIC6.18□□□□□ -1.42
USP41Q3LFD5 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.18□□□□□ -1.42
USP41Q3LFD5 HMGN1P8-201ENST00000463578 288 ntBASIC6.18□□□□□ -1.42
USP41Q3LFD5 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.18□□□□□ -1.42
USP41Q3LFD5 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.18□□□□□ -1.42
USP41Q3LFD5 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.18□□□□□ -1.42
USP41Q3LFD5 AC021146.10-201ENST00000515628 706 ntBASIC6.18□□□□□ -1.42
USP41Q3LFD5 BX510359.5-201ENST00000515651 304 ntBASIC6.18□□□□□ -1.42
USP41Q3LFD5 RN7SKP288-201ENST00000516227 268 ntBASIC6.18□□□□□ -1.42
USP41Q3LFD5 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.18□□□□□ -1.42
USP41Q3LFD5 IGLV2-28-201ENST00000520681 304 ntBASIC6.18□□□□□ -1.42
USP41Q3LFD5 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.18□□□□□ -1.42
USP41Q3LFD5 MRPS16P1-201ENST00000523462 412 ntBASIC6.18□□□□□ -1.42
USP41Q3LFD5 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.18□□□□□ -1.42
USP41Q3LFD5 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC6.18□□□□□ -1.42
USP41Q3LFD5 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC6.18□□□□□ -1.42
USP41Q3LFD5 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.18□□□□□ -1.42
USP41Q3LFD5 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.18□□□□□ -1.42
USP41Q3LFD5 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.18□□□□□ -1.42
USP41Q3LFD5 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.18□□□□□ -1.42
USP41Q3LFD5 MIR4443-201ENST00000585052 53 ntBASIC6.18□□□□□ -1.42
USP41Q3LFD5 AC245128.3-201ENST00000594721 748 ntBASIC6.18□□□□□ -1.42
USP41Q3LFD5 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.18□□□□□ -1.42
USP41Q3LFD5 SUMO2P15-201ENST00000604285 278 ntBASIC6.18□□□□□ -1.42
USP41Q3LFD5 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.18□□□□□ -1.42
USP41Q3LFD5 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC6.18□□□□□ -1.42
USP41Q3LFD5 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.18□□□□□ -1.42
USP41Q3LFD5 AL035661.1-201ENST00000620459 1144 ntBASIC6.18□□□□□ -1.42
USP41Q3LFD5 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
USP41Q3LFD5 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
USP41Q3LFD5 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.18□□□□□ -1.42
USP41Q3LFD5 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
USP41Q3LFD5 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
USP41Q3LFD5 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.18□□□□□ -1.42
USP41Q3LFD5 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.17□□□□□ -1.42
USP41Q3LFD5 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.17□□□□□ -1.42
USP41Q3LFD5 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.17□□□□□ -1.42
USP41Q3LFD5 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
USP41Q3LFD5 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
USP41Q3LFD5 AC020656.2-201ENST00000613291 5309 ntBASIC6.17□□□□□ -1.42
USP41Q3LFD5 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.17□□□□□ -1.42
USP41Q3LFD5 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
USP41Q3LFD5 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
USP41Q3LFD5 OR5T3-201ENST00000303059 1023 ntBASIC6.17□□□□□ -1.42
USP41Q3LFD5 DHFRP5-201ENST00000406944 564 ntBASIC6.17□□□□□ -1.42
USP41Q3LFD5 RMRPP5-201ENST00000411156 267 ntBASIC6.17□□□□□ -1.42
USP41Q3LFD5 AL357752.1-201ENST00000412817 349 ntBASIC6.17□□□□□ -1.42
USP41Q3LFD5 NPM1P4-201ENST00000414095 812 ntBASIC6.17□□□□□ -1.42
USP41Q3LFD5 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.17□□□□□ -1.42
USP41Q3LFD5 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.17□□□□□ -1.42
USP41Q3LFD5 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC6.17□□□□□ -1.42
USP41Q3LFD5 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC6.17□□□□□ -1.42
USP41Q3LFD5 AC092651.1-201ENST00000426110 312 ntBASIC6.17□□□□□ -1.42
USP41Q3LFD5 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.17□□□□□ -1.42
USP41Q3LFD5 FMO7P-201ENST00000436045 768 ntBASIC6.17□□□□□ -1.42
USP41Q3LFD5 AL390879.1-201ENST00000439143 386 ntBASIC6.17□□□□□ -1.42
USP41Q3LFD5 AL163193.1-201ENST00000444895 788 ntBASIC6.17□□□□□ -1.42
USP41Q3LFD5 AL450996.1-201ENST00000445574 1202 ntBASIC6.17□□□□□ -1.42
USP41Q3LFD5 RNU1-88P-201ENST00000459274 128 ntBASIC6.17□□□□□ -1.42
USP41Q3LFD5 AL355032.1-201ENST00000472981 438 ntBASIC6.17□□□□□ -1.42
USP41Q3LFD5 RPL32P33-201ENST00000487023 394 ntBASIC6.17□□□□□ -1.42
USP41Q3LFD5 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.17□□□□□ -1.42
USP41Q3LFD5 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.17□□□□□ -1.42
USP41Q3LFD5 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.17□□□□□ -1.42
USP41Q3LFD5 MIR2117-201ENST00000516780 80 ntBASIC6.17□□□□□ -1.42
USP41Q3LFD5 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.17□□□□□ -1.42
USP41Q3LFD5 AC051619.2-201ENST00000559063 397 ntBASIC6.17□□□□□ -1.42
USP41Q3LFD5 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.17□□□□□ -1.42
USP41Q3LFD5 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC6.17□□□□□ -1.42
USP41Q3LFD5 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.17□□□□□ -1.42
USP41Q3LFD5 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
USP41Q3LFD5 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
USP41Q3LFD5 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.17□□□□□ -1.42
USP41Q3LFD5 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC6.17□□□□□ -1.42
USP41Q3LFD5 OR7E18P-201ENST00000592589 702 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms