Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HIST1H1AQ02539 SELENOWP1-201ENST00000322792 252 ntBASIC4.37□□□□□ -1.71
HIST1H1AQ02539 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HIST1H1AQ02539 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC4.37□□□□□ -1.71
HIST1H1AQ02539 CBX1P3-201ENST00000413296 527 ntBASIC4.37□□□□□ -1.71
HIST1H1AQ02539 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC4.37□□□□□ -1.71
HIST1H1AQ02539 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC4.37□□□□□ -1.71
HIST1H1AQ02539 TRGV5P-201ENST00000419915 354 ntBASIC4.37□□□□□ -1.71
HIST1H1AQ02539 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC4.37□□□□□ -1.71
HIST1H1AQ02539 RPL5P7-201ENST00000444235 813 ntBASIC4.37□□□□□ -1.71
HIST1H1AQ02539 AC009963.3-201ENST00000458090 486 ntBASIC4.37□□□□□ -1.71
HIST1H1AQ02539 AC098818.1-201ENST00000478593 252 ntBASIC4.37□□□□□ -1.71
HIST1H1AQ02539 AC099521.1-201ENST00000482557 334 ntBASIC4.37□□□□□ -1.71
HIST1H1AQ02539 RN7SL568P-201ENST00000493069 298 ntBASIC4.37□□□□□ -1.71
HIST1H1AQ02539 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC4.37□□□□□ -1.71
HIST1H1AQ02539 AC106822.1-201ENST00000502647 526 ntBASIC4.37□□□□□ -1.71
HIST1H1AQ02539 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC4.37□□□□□ -1.71
HIST1H1AQ02539 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC4.37□□□□□ -1.71
HIST1H1AQ02539 RFPL4AP5-201ENST00000514977 504 ntBASIC4.37□□□□□ -1.71
HIST1H1AQ02539 RN7SKP238-201ENST00000516483 249 ntBASIC4.37□□□□□ -1.71
HIST1H1AQ02539 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC4.37□□□□□ -1.71
HIST1H1AQ02539 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC4.37□□□□□ -1.71
HIST1H1AQ02539 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC4.37□□□□□ -1.71
HIST1H1AQ02539 ASB8-203ENST00000535988 679 ntTSL 2 BASIC4.37□□□□□ -1.71
HIST1H1AQ02539 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC4.37□□□□□ -1.71
HIST1H1AQ02539 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
HIST1H1AQ02539 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC4.37□□□□□ -1.71
HIST1H1AQ02539 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HIST1H1AQ02539 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC4.37□□□□□ -1.71
HIST1H1AQ02539 AC002519.2-203ENST00000567043 837 ntBASIC4.37□□□□□ -1.71
HIST1H1AQ02539 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
HIST1H1AQ02539 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC4.37□□□□□ -1.71
HIST1H1AQ02539 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC4.37□□□□□ -1.71
HIST1H1AQ02539 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC4.37□□□□□ -1.71
HIST1H1AQ02539 HIRAP1-201ENST00000605318 787 ntBASIC4.37□□□□□ -1.71
HIST1H1AQ02539 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC4.37□□□□□ -1.71
HIST1H1AQ02539 HTR1DP1-201ENST00000616500 888 ntBASIC4.37□□□□□ -1.71
HIST1H1AQ02539 MIR6133-201ENST00000617057 108 ntBASIC4.37□□□□□ -1.71
HIST1H1AQ02539 ATM-229ENST00000639953 587 ntTSL 5 BASIC4.37□□□□□ -1.71
HIST1H1AQ02539 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HIST1H1AQ02539 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
HIST1H1AQ02539 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
HIST1H1AQ02539 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HIST1H1AQ02539 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HIST1H1AQ02539 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
HIST1H1AQ02539 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
HIST1H1AQ02539 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC4.37□□□□□ -1.71
HIST1H1AQ02539 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HIST1H1AQ02539 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.37□□□□□ -1.71
HIST1H1AQ02539 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.37□□□□□ -1.71
HIST1H1AQ02539 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.36□□□□□ -1.71
HIST1H1AQ02539 PSG10P-201ENST00000501199 1500 ntBASIC4.36□□□□□ -1.71
HIST1H1AQ02539 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
HIST1H1AQ02539 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.36□□□□□ -1.71
HIST1H1AQ02539 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HIST1H1AQ02539 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HIST1H1AQ02539 RNU1-136P-201ENST00000384181 164 ntBASIC4.36□□□□□ -1.71
HIST1H1AQ02539 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC4.36□□□□□ -1.71
HIST1H1AQ02539 RN7SKP86-201ENST00000410454 332 ntBASIC4.36□□□□□ -1.71
HIST1H1AQ02539 RN7SKP97-201ENST00000410966 333 ntBASIC4.36□□□□□ -1.71
HIST1H1AQ02539 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.36□□□□□ -1.71
HIST1H1AQ02539 OR10T1P-201ENST00000424327 947 ntBASIC4.36□□□□□ -1.71
HIST1H1AQ02539 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC4.36□□□□□ -1.71
HIST1H1AQ02539 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC4.36□□□□□ -1.71
HIST1H1AQ02539 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.36□□□□□ -1.71
HIST1H1AQ02539 DEFA9P-201ENST00000433042 285 ntBASIC4.36□□□□□ -1.71
HIST1H1AQ02539 TUBB4BP6-201ENST00000437576 479 ntBASIC4.36□□□□□ -1.71
HIST1H1AQ02539 RPS12P17-201ENST00000438591 377 ntBASIC4.36□□□□□ -1.71
HIST1H1AQ02539 AC015983.1-201ENST00000441577 373 ntBASIC4.36□□□□□ -1.71
HIST1H1AQ02539 AC012512.1-201ENST00000446594 718 ntBASIC4.36□□□□□ -1.71
HIST1H1AQ02539 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC4.36□□□□□ -1.71
HIST1H1AQ02539 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC4.36□□□□□ -1.71
HIST1H1AQ02539 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC4.36□□□□□ -1.71
HIST1H1AQ02539 ENPP7P11-201ENST00000505915 627 ntBASIC4.36□□□□□ -1.71
HIST1H1AQ02539 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.36□□□□□ -1.71
HIST1H1AQ02539 GAPDHP62-201ENST00000515313 990 ntBASIC4.36□□□□□ -1.71
HIST1H1AQ02539 WBP1LP3-201ENST00000523033 208 ntBASIC4.36□□□□□ -1.71
HIST1H1AQ02539 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC4.36□□□□□ -1.71
HIST1H1AQ02539 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC4.36□□□□□ -1.71
HIST1H1AQ02539 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC4.36□□□□□ -1.71
HIST1H1AQ02539 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC4.36□□□□□ -1.71
HIST1H1AQ02539 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC4.36□□□□□ -1.71
HIST1H1AQ02539 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC4.36□□□□□ -1.71
HIST1H1AQ02539 AC138207.8-204ENST00000579588 527 ntBASIC4.36□□□□□ -1.71
HIST1H1AQ02539 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC4.36□□□□□ -1.71
HIST1H1AQ02539 MIR3936-201ENST00000584304 110 ntBASIC4.36□□□□□ -1.71
HIST1H1AQ02539 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.36□□□□□ -1.71
HIST1H1AQ02539 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
HIST1H1AQ02539 AC068768.2-201ENST00000602352 343 ntBASIC4.36□□□□□ -1.71
HIST1H1AQ02539 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC4.36□□□□□ -1.71
HIST1H1AQ02539 AC245014.3-201ENST00000618589 347 ntBASIC4.36□□□□□ -1.71
HIST1H1AQ02539 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC4.36□□□□□ -1.71
HIST1H1AQ02539 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC4.36□□□□□ -1.71
HIST1H1AQ02539 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HIST1H1AQ02539 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC4.36□□□□□ -1.71
HIST1H1AQ02539 OR11H2-202ENST00000641517 1085 ntBASIC4.36□□□□□ -1.71
HIST1H1AQ02539 CPS1-IT1-201ENST00000628368 2306 ntBASIC4.36□□□□□ -1.71
HIST1H1AQ02539 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HIST1H1AQ02539 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
HIST1H1AQ02539 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 138 ms