Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AL162739.1-201ENST00000450606 307 ntBASIC7□□□□□ -1.29
RHBDL3P58872 LRRC37A14P-201ENST00000452297 462 ntBASIC7□□□□□ -1.29
RHBDL3P58872 AC069277.2-201ENST00000454211 432 ntBASIC7□□□□□ -1.29
RHBDL3P58872 RPL38P3-201ENST00000484463 213 ntBASIC7□□□□□ -1.29
RHBDL3P58872 RN7SL214P-201ENST00000487317 265 ntBASIC7□□□□□ -1.29
RHBDL3P58872 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC7□□□□□ -1.29
RHBDL3P58872 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC7□□□□□ -1.29
RHBDL3P58872 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC7□□□□□ -1.29
RHBDL3P58872 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC7□□□□□ -1.29
RHBDL3P58872 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC7□□□□□ -1.29
RHBDL3P58872 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC7□□□□□ -1.29
RHBDL3P58872 ATP5LP3-201ENST00000514223 304 ntBASIC7□□□□□ -1.29
RHBDL3P58872 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC7□□□□□ -1.29
RHBDL3P58872 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC7□□□□□ -1.29
RHBDL3P58872 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC7□□□□□ -1.29
RHBDL3P58872 AC090651.1-201ENST00000567865 634 ntBASIC7□□□□□ -1.29
RHBDL3P58872 SNX6P1-201ENST00000601728 1224 ntBASIC7□□□□□ -1.29
RHBDL3P58872 AC084373.1-201ENST00000603311 235 ntBASIC7□□□□□ -1.29
RHBDL3P58872 AL589674.2-201ENST00000604304 337 ntBASIC7□□□□□ -1.29
RHBDL3P58872 AL135786.2-201ENST00000608422 615 ntBASIC7□□□□□ -1.29
RHBDL3P58872 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
RHBDL3P58872 AC087565.3-203ENST00000641018 837 ntBASIC7□□□□□ -1.29
RHBDL3P58872 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC7□□□□□ -1.29
RHBDL3P58872 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC7□□□□□ -1.29
RHBDL3P58872 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC7□□□□□ -1.29
RHBDL3P58872 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC7□□□□□ -1.29
RHBDL3P58872 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC7□□□□□ -1.29
RHBDL3P58872 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC7□□□□□ -1.29
RHBDL3P58872 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RHBDL3P58872 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.99□□□□□ -1.29
RHBDL3P58872 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.99□□□□□ -1.29
RHBDL3P58872 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
RHBDL3P58872 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.99□□□□□ -1.29
RHBDL3P58872 AP000866.6-201ENST00000638898 3579 ntBASIC6.99□□□□□ -1.29
RHBDL3P58872 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RHBDL3P58872 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
RHBDL3P58872 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RHBDL3P58872 MTND4P21-201ENST00000453886 1357 ntBASIC6.99□□□□□ -1.29
RHBDL3P58872 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
RHBDL3P58872 AC132825.1-201ENST00000463573 2247 ntBASIC6.99□□□□□ -1.29
RHBDL3P58872 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RHBDL3P58872 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC6.99□□□□□ -1.29
RHBDL3P58872 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
RHBDL3P58872 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RHBDL3P58872 MIR143-201ENST00000385300 106 ntBASIC6.99□□□□□ -1.29
RHBDL3P58872 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.99□□□□□ -1.29
RHBDL3P58872 AL391361.1-201ENST00000405580 489 ntBASIC6.99□□□□□ -1.29
RHBDL3P58872 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
RHBDL3P58872 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.99□□□□□ -1.29
RHBDL3P58872 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC6.99□□□□□ -1.29
RHBDL3P58872 AL663074.2-201ENST00000440621 479 ntBASIC6.99□□□□□ -1.29
RHBDL3P58872 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC6.99□□□□□ -1.29
RHBDL3P58872 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.99□□□□□ -1.29
RHBDL3P58872 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.99□□□□□ -1.29
RHBDL3P58872 AC009120.1-201ENST00000493458 473 ntBASIC6.99□□□□□ -1.29
RHBDL3P58872 AC093770.1-201ENST00000511559 571 ntBASIC6.99□□□□□ -1.29
RHBDL3P58872 SNORA43.3-201ENST00000517240 103 ntBASIC6.99□□□□□ -1.29
RHBDL3P58872 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC6.99□□□□□ -1.29
RHBDL3P58872 AC087888.1-201ENST00000550884 1254 ntBASIC6.99□□□□□ -1.29
RHBDL3P58872 LINC00557-201ENST00000563184 1279 ntBASIC6.99□□□□□ -1.29
RHBDL3P58872 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.99□□□□□ -1.29
RHBDL3P58872 MIR4489-201ENST00000578869 62 ntBASIC6.99□□□□□ -1.29
RHBDL3P58872 MIR4505-201ENST00000582238 73 ntBASIC6.99□□□□□ -1.29
RHBDL3P58872 AC007448.1-201ENST00000582714 234 ntBASIC6.99□□□□□ -1.29
RHBDL3P58872 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC6.99□□□□□ -1.29
RHBDL3P58872 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.99□□□□□ -1.29
RHBDL3P58872 FO393422.1-201ENST00000603908 708 ntBASIC6.99□□□□□ -1.29
RHBDL3P58872 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
RHBDL3P58872 AL445670.1-201ENST00000618889 801 ntBASIC6.99□□□□□ -1.29
RHBDL3P58872 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.99□□□□□ -1.29
RHBDL3P58872 CU639417.4-201ENST00000623928 207 ntBASIC6.99□□□□□ -1.29
RHBDL3P58872 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.99□□□□□ -1.29
RHBDL3P58872 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC6.99□□□□□ -1.29
RHBDL3P58872 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RHBDL3P58872 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RHBDL3P58872 AC022034.1-201ENST00000512867 2156 ntBASIC6.99□□□□□ -1.29
RHBDL3P58872 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.99□□□□□ -1.29
RHBDL3P58872 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
RHBDL3P58872 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RHBDL3P58872 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
RHBDL3P58872 AC007342.7-201ENST00000624610 2337 ntBASIC6.99□□□□□ -1.29
RHBDL3P58872 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.99□□□□□ -1.29
RHBDL3P58872 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC6.99□□□□□ -1.29
RHBDL3P58872 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.99□□□□□ -1.29
RHBDL3P58872 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
RHBDL3P58872 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RHBDL3P58872 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
RHBDL3P58872 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.98□□□□□ -1.29
RHBDL3P58872 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.98□□□□□ -1.29
RHBDL3P58872 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
RHBDL3P58872 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6.98□□□□□ -1.29
RHBDL3P58872 AC110792.3-201ENST00000595906 1614 ntBASIC6.98□□□□□ -1.29
RHBDL3P58872 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
RHBDL3P58872 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
RHBDL3P58872 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.98□□□□□ -1.29
RHBDL3P58872 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC6.98□□□□□ -1.29
RHBDL3P58872 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
RHBDL3P58872 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.98□□□□□ -1.29
RHBDL3P58872 AL355377.1-201ENST00000621125 1653 ntBASIC6.98□□□□□ -1.29
RHBDL3P58872 RNA5SP132-201ENST00000364725 118 ntBASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms