Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 LRRC6P1-201ENST00000532188 885 ntBASIC5.78□□□□□ -1.48
SUMO3P55854 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.78□□□□□ -1.48
SUMO3P55854 AC244502.2-201ENST00000543361 851 ntBASIC5.78□□□□□ -1.48
SUMO3P55854 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.78□□□□□ -1.48
SUMO3P55854 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.78□□□□□ -1.48
SUMO3P55854 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC5.78□□□□□ -1.48
SUMO3P55854 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SUMO3P55854 LINC01613-201ENST00000561476 2780 ntBASIC5.78□□□□□ -1.48
SUMO3P55854 MIR744-201ENST00000578242 98 ntBASIC5.78□□□□□ -1.48
SUMO3P55854 AL589765.6-201ENST00000601909 549 ntBASIC5.78□□□□□ -1.48
SUMO3P55854 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.78□□□□□ -1.48
SUMO3P55854 AC005034.3-201ENST00000604845 1747 ntBASIC5.78□□□□□ -1.48
SUMO3P55854 AC011891.2-201ENST00000604949 397 ntBASIC5.78□□□□□ -1.48
SUMO3P55854 AC093424.1-201ENST00000604999 338 ntBASIC5.78□□□□□ -1.48
SUMO3P55854 AL365400.2-201ENST00000605604 902 ntBASIC5.78□□□□□ -1.48
SUMO3P55854 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.78□□□□□ -1.48
SUMO3P55854 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SUMO3P55854 AC087683.2-201ENST00000611384 326 ntBASIC5.78□□□□□ -1.48
SUMO3P55854 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.78□□□□□ -1.48
SUMO3P55854 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC5.78□□□□□ -1.48
SUMO3P55854 AC007342.8-201ENST00000623278 678 ntBASIC5.78□□□□□ -1.48
SUMO3P55854 AC139713.2-210ENST00000641741 992 ntBASIC5.78□□□□□ -1.48
SUMO3P55854 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SUMO3P55854 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.78□□□□□ -1.48
SUMO3P55854 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
SUMO3P55854 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.78□□□□□ -1.48
SUMO3P55854 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
SUMO3P55854 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.78□□□□□ -1.48
SUMO3P55854 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
SUMO3P55854 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.78□□□□□ -1.48
SUMO3P55854 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SUMO3P55854 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SUMO3P55854 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
SUMO3P55854 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SUMO3P55854 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SUMO3P55854 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
SUMO3P55854 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SUMO3P55854 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SUMO3P55854 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
SUMO3P55854 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.77□□□□□ -1.49
SUMO3P55854 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SUMO3P55854 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
SUMO3P55854 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SUMO3P55854 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SUMO3P55854 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
SUMO3P55854 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.77□□□□□ -1.49
SUMO3P55854 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SUMO3P55854 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SUMO3P55854 PROS2P-201ENST00000474651 1951 ntBASIC5.77□□□□□ -1.49
SUMO3P55854 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
SUMO3P55854 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.77□□□□□ -1.49
SUMO3P55854 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
SUMO3P55854 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.77□□□□□ -1.49
SUMO3P55854 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
SUMO3P55854 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SUMO3P55854 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SUMO3P55854 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.77□□□□□ -1.49
SUMO3P55854 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SUMO3P55854 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.77□□□□□ -1.49
SUMO3P55854 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SUMO3P55854 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
SUMO3P55854 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
SUMO3P55854 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC5.77□□□□□ -1.49
SUMO3P55854 VTA1P1-201ENST00000414044 866 ntBASIC5.77□□□□□ -1.49
SUMO3P55854 DHFRP2-201ENST00000414224 547 ntBASIC5.77□□□□□ -1.49
SUMO3P55854 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.77□□□□□ -1.49
SUMO3P55854 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
SUMO3P55854 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SUMO3P55854 NAP1L4P2-201ENST00000425958 899 ntBASIC5.77□□□□□ -1.49
SUMO3P55854 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC5.77□□□□□ -1.49
SUMO3P55854 AC245047.2-201ENST00000441060 530 ntBASIC5.77□□□□□ -1.49
SUMO3P55854 RPL12P49-201ENST00000441100 121 ntBASIC5.77□□□□□ -1.49
SUMO3P55854 AL353093.1-201ENST00000441292 436 ntBASIC5.77□□□□□ -1.49
SUMO3P55854 AC092601.1-201ENST00000444526 383 ntBASIC5.77□□□□□ -1.49
SUMO3P55854 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC5.77□□□□□ -1.49
SUMO3P55854 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.77□□□□□ -1.49
SUMO3P55854 MORF4-201ENST00000447135 971 ntBASIC5.77□□□□□ -1.49
SUMO3P55854 ZNF736P8Y-201ENST00000451913 669 ntBASIC5.77□□□□□ -1.49
SUMO3P55854 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC5.77□□□□□ -1.49
SUMO3P55854 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.77□□□□□ -1.49
SUMO3P55854 OR9A1P-202ENST00000484361 945 ntBASIC5.77□□□□□ -1.49
SUMO3P55854 GM2AP2-201ENST00000491764 562 ntBASIC5.77□□□□□ -1.49
SUMO3P55854 RPL17P2-201ENST00000491913 451 ntBASIC5.77□□□□□ -1.49
SUMO3P55854 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.77□□□□□ -1.49
SUMO3P55854 RPL21P131-201ENST00000497298 483 ntBASIC5.77□□□□□ -1.49
SUMO3P55854 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.77□□□□□ -1.49
SUMO3P55854 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC5.77□□□□□ -1.49
SUMO3P55854 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.77□□□□□ -1.49
SUMO3P55854 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC5.77□□□□□ -1.49
SUMO3P55854 AC093752.1-206ENST00000511823 336 ntBASIC5.77□□□□□ -1.49
SUMO3P55854 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.77□□□□□ -1.49
SUMO3P55854 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.77□□□□□ -1.49
SUMO3P55854 RNA5SP303-201ENST00000516192 130 ntBASIC5.77□□□□□ -1.49
SUMO3P55854 RNU6-311P-201ENST00000516224 102 ntBASIC5.77□□□□□ -1.49
SUMO3P55854 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.77□□□□□ -1.49
SUMO3P55854 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.77□□□□□ -1.49
SUMO3P55854 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.77□□□□□ -1.49
SUMO3P55854 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.77□□□□□ -1.49
SUMO3P55854 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.77□□□□□ -1.49
SUMO3P55854 AC087897.1-201ENST00000550134 156 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms