Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC7.78□□□□□ -1.16
MSH6P52701 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
MSH6P52701 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC7.78□□□□□ -1.16
MSH6P52701 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
MSH6P52701 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
MSH6P52701 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
MSH6P52701 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC7.78□□□□□ -1.16
MSH6P52701 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
MSH6P52701 AP003170.5-201ENST00000397185 335 ntBASIC7.78□□□□□ -1.16
MSH6P52701 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC7.78□□□□□ -1.16
MSH6P52701 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC7.78□□□□□ -1.16
MSH6P52701 AL590139.1-201ENST00000416267 400 ntBASIC7.78□□□□□ -1.16
MSH6P52701 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC7.78□□□□□ -1.16
MSH6P52701 COX6CP17-201ENST00000421389 185 ntBASIC7.78□□□□□ -1.16
MSH6P52701 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC7.78□□□□□ -1.16
MSH6P52701 AL138878.2-201ENST00000440581 1241 ntBASIC7.78□□□□□ -1.16
MSH6P52701 AC011753.3-201ENST00000443436 406 ntBASIC7.78□□□□□ -1.16
MSH6P52701 AC092106.1-201ENST00000444291 373 ntBASIC7.78□□□□□ -1.16
MSH6P52701 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC7.78□□□□□ -1.16
MSH6P52701 AL162739.1-201ENST00000450606 307 ntBASIC7.78□□□□□ -1.16
MSH6P52701 HNRNPDLP2-201ENST00000455248 751 ntBASIC7.78□□□□□ -1.16
MSH6P52701 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC7.78□□□□□ -1.16
MSH6P52701 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC7.78□□□□□ -1.16
MSH6P52701 AC092905.1-201ENST00000467527 949 ntBASIC7.78□□□□□ -1.16
MSH6P52701 RN7SL385P-201ENST00000468873 276 ntBASIC7.78□□□□□ -1.16
MSH6P52701 AC105384.2-201ENST00000508433 640 ntBASIC7.78□□□□□ -1.16
MSH6P52701 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
MSH6P52701 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC7.78□□□□□ -1.16
MSH6P52701 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC7.78□□□□□ -1.16
MSH6P52701 AL023583.1-201ENST00000607518 1143 ntBASIC7.78□□□□□ -1.16
MSH6P52701 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC7.78□□□□□ -1.16
MSH6P52701 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC7.78□□□□□ -1.16
MSH6P52701 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
MSH6P52701 AL034546.1-201ENST00000623740 3693 ntBASIC7.78□□□□□ -1.16
MSH6P52701 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
MSH6P52701 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
MSH6P52701 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
MSH6P52701 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC7.78□□□□□ -1.16
MSH6P52701 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC7.77□□□□□ -1.16
MSH6P52701 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC7.77□□□□□ -1.16
MSH6P52701 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
MSH6P52701 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
MSH6P52701 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC7.77□□□□□ -1.17
MSH6P52701 RN7SKP6-201ENST00000364795 319 ntBASIC7.77□□□□□ -1.17
MSH6P52701 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC7.77□□□□□ -1.17
MSH6P52701 AC079922.1-201ENST00000443291 359 ntBASIC7.77□□□□□ -1.17
MSH6P52701 TPT1P12-201ENST00000448968 492 ntBASIC7.77□□□□□ -1.17
MSH6P52701 RN7SL459P-201ENST00000481078 302 ntBASIC7.77□□□□□ -1.17
MSH6P52701 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC7.77□□□□□ -1.17
MSH6P52701 RN7SKP288-201ENST00000516227 268 ntBASIC7.77□□□□□ -1.17
MSH6P52701 AC244502.2-201ENST00000543361 851 ntBASIC7.77□□□□□ -1.17
MSH6P52701 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC7.77□□□□□ -1.17
MSH6P52701 AC095055.1-201ENST00000603472 1113 ntBASIC7.77□□□□□ -1.17
MSH6P52701 AC008745.1-201ENST00000604064 271 ntBASIC7.77□□□□□ -1.17
MSH6P52701 AC109583.2-201ENST00000617367 129 ntBASIC7.77□□□□□ -1.17
MSH6P52701 CYP4F35P-202ENST00000636121 390 ntBASIC7.77□□□□□ -1.17
MSH6P52701 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC7.77□□□□□ -1.17
MSH6P52701 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
MSH6P52701 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
MSH6P52701 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
MSH6P52701 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
MSH6P52701 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
MSH6P52701 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
MSH6P52701 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
MSH6P52701 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
MSH6P52701 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC7.76□□□□□ -1.17
MSH6P52701 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
MSH6P52701 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
MSH6P52701 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
MSH6P52701 AC116036.1-201ENST00000412199 367 ntBASIC7.76□□□□□ -1.17
MSH6P52701 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC7.76□□□□□ -1.17
MSH6P52701 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC7.76□□□□□ -1.17
MSH6P52701 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC7.76□□□□□ -1.17
MSH6P52701 RPL31P44-201ENST00000447680 377 ntBASIC7.76□□□□□ -1.17
MSH6P52701 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC7.76□□□□□ -1.17
MSH6P52701 RPS23P2-201ENST00000463671 415 ntBASIC7.76□□□□□ -1.17
MSH6P52701 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC7.76□□□□□ -1.17
MSH6P52701 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC7.76□□□□□ -1.17
MSH6P52701 NMNAT1P5-201ENST00000559657 841 ntBASIC7.76□□□□□ -1.17
MSH6P52701 CASC22-201ENST00000569713 386 ntTSL 5 BASIC7.76□□□□□ -1.17
MSH6P52701 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC7.76□□□□□ -1.17
MSH6P52701 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC7.76□□□□□ -1.17
MSH6P52701 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC7.76□□□□□ -1.17
MSH6P52701 AC079414.3-201ENST00000612986 1090 ntBASIC7.76□□□□□ -1.17
MSH6P52701 AC009704.2-201ENST00000618739 483 ntBASIC7.76□□□□□ -1.17
MSH6P52701 AC130304.1-201ENST00000622942 2385 ntBASIC7.76□□□□□ -1.17
MSH6P52701 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC7.76□□□□□ -1.17
MSH6P52701 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC7.76□□□□□ -1.17
MSH6P52701 LCOR-201ENST00000286067 4542 ntBASIC7.76□□□□□ -1.17
MSH6P52701 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC7.76□□□□□ -1.17
MSH6P52701 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC7.76□□□□□ -1.17
MSH6P52701 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
MSH6P52701 INTS6P1-201ENST00000504674 2530 ntBASIC7.75□□□□□ -1.17
MSH6P52701 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
MSH6P52701 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC7.75□□□□□ -1.17
MSH6P52701 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
MSH6P52701 RNA5SP123-201ENST00000363244 119 ntBASIC7.75□□□□□ -1.17
MSH6P52701 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
MSH6P52701 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC7.75□□□□□ -1.17
MSH6P52701 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC7.75□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms