Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RORAP35398 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.51□□□□□ -1.53
RORAP35398 AL354766.1-201ENST00000423396 542 ntBASIC5.51□□□□□ -1.53
RORAP35398 AL662874.1-201ENST00000426065 230 ntBASIC5.51□□□□□ -1.53
RORAP35398 HMGB3P24-201ENST00000433260 622 ntBASIC5.51□□□□□ -1.53
RORAP35398 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.51□□□□□ -1.53
RORAP35398 AC073909.1-201ENST00000447112 999 ntBASIC5.51□□□□□ -1.53
RORAP35398 AL603882.1-201ENST00000463059 681 ntBASIC5.51□□□□□ -1.53
RORAP35398 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.51□□□□□ -1.53
RORAP35398 RPL38P3-201ENST00000484463 213 ntBASIC5.51□□□□□ -1.53
RORAP35398 AC074087.1-201ENST00000512059 724 ntBASIC5.51□□□□□ -1.53
RORAP35398 RPL7L1P4-201ENST00000513004 707 ntBASIC5.51□□□□□ -1.53
RORAP35398 RNA5SP362-201ENST00000516048 118 ntBASIC5.51□□□□□ -1.53
RORAP35398 HMGB1P42-201ENST00000532126 553 ntBASIC5.51□□□□□ -1.53
RORAP35398 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.51□□□□□ -1.53
RORAP35398 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.51□□□□□ -1.53
RORAP35398 AC007346.2-201ENST00000564816 892 ntBASIC5.51□□□□□ -1.53
RORAP35398 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.51□□□□□ -1.53
RORAP35398 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.51□□□□□ -1.53
RORAP35398 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.51□□□□□ -1.53
RORAP35398 MIR3176-201ENST00000582210 90 ntBASIC5.51□□□□□ -1.53
RORAP35398 MIR4260-201ENST00000583107 67 ntBASIC5.51□□□□□ -1.53
RORAP35398 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.51□□□□□ -1.53
RORAP35398 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.51□□□□□ -1.53
RORAP35398 AL512624.1-201ENST00000613638 469 ntBASIC5.51□□□□□ -1.53
RORAP35398 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.51□□□□□ -1.53
RORAP35398 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.51□□□□□ -1.53
RORAP35398 AC007842.1-201ENST00000597336 2039 ntBASIC5.51□□□□□ -1.53
RORAP35398 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RORAP35398 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
RORAP35398 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.51□□□□□ -1.53
RORAP35398 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.51□□□□□ -1.53
RORAP35398 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RORAP35398 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.51□□□□□ -1.53
RORAP35398 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RORAP35398 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RORAP35398 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RORAP35398 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
RORAP35398 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
RORAP35398 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
RORAP35398 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
RORAP35398 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RORAP35398 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
RORAP35398 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RORAP35398 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.5□□□□□ -1.53
RORAP35398 AC022164.1-201ENST00000568767 2673 ntBASIC5.5□□□□□ -1.53
RORAP35398 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
RORAP35398 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.5□□□□□ -1.53
RORAP35398 OR2AT2P-201ENST00000413438 905 ntBASIC5.5□□□□□ -1.53
RORAP35398 AL596448.1-201ENST00000415024 392 ntBASIC5.5□□□□□ -1.53
RORAP35398 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.5□□□□□ -1.53
RORAP35398 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.5□□□□□ -1.53
RORAP35398 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.5□□□□□ -1.53
RORAP35398 AC023141.8-201ENST00000442554 208 ntBASIC5.5□□□□□ -1.53
RORAP35398 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.5□□□□□ -1.53
RORAP35398 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.5□□□□□ -1.53
RORAP35398 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.5□□□□□ -1.53
RORAP35398 RNU7-157P-201ENST00000459600 66 ntBASIC5.5□□□□□ -1.53
RORAP35398 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
RORAP35398 RN7SL466P-201ENST00000497546 295 ntBASIC5.5□□□□□ -1.53
RORAP35398 RN7SL284P-201ENST00000498823 275 ntBASIC5.5□□□□□ -1.53
RORAP35398 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.5□□□□□ -1.53
RORAP35398 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.5□□□□□ -1.53
RORAP35398 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.5□□□□□ -1.53
RORAP35398 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.5□□□□□ -1.53
RORAP35398 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.5□□□□□ -1.53
RORAP35398 AC090022.1-201ENST00000546569 311 ntBASIC5.5□□□□□ -1.53
RORAP35398 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.5□□□□□ -1.53
RORAP35398 IGBP1P1-201ENST00000554337 1009 ntBASIC5.5□□□□□ -1.53
RORAP35398 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.5□□□□□ -1.53
RORAP35398 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.5□□□□□ -1.53
RORAP35398 MIR4505-201ENST00000582238 73 ntBASIC5.5□□□□□ -1.53
RORAP35398 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.5□□□□□ -1.53
RORAP35398 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.5□□□□□ -1.53
RORAP35398 FO393422.1-201ENST00000603908 708 ntBASIC5.5□□□□□ -1.53
RORAP35398 AL589674.2-201ENST00000604304 337 ntBASIC5.5□□□□□ -1.53
RORAP35398 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.5□□□□□ -1.53
RORAP35398 CU639417.4-201ENST00000623928 207 ntBASIC5.5□□□□□ -1.53
RORAP35398 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.5□□□□□ -1.53
RORAP35398 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.5□□□□□ -1.53
RORAP35398 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.5□□□□□ -1.53
RORAP35398 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
RORAP35398 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RORAP35398 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.49□□□□□ -1.53
RORAP35398 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
RORAP35398 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.49□□□□□ -1.53
RORAP35398 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
RORAP35398 ZNF101P1-201ENST00000435701 1720 ntBASIC5.49□□□□□ -1.53
RORAP35398 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.49□□□□□ -1.53
RORAP35398 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
RORAP35398 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.49□□□□□ -1.53
RORAP35398 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RORAP35398 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.49□□□□□ -1.53
RORAP35398 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.49□□□□□ -1.53
RORAP35398 AL357752.1-201ENST00000412817 349 ntBASIC5.49□□□□□ -1.53
RORAP35398 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.49□□□□□ -1.53
RORAP35398 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.49□□□□□ -1.53
RORAP35398 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.49□□□□□ -1.53
RORAP35398 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RORAP35398 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms