Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RPA3P35244 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RPA3P35244 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
RPA3P35244 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RPA3P35244 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.63□□□□□ -1.51
RPA3P35244 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
RPA3P35244 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.62□□□□□ -1.51
RPA3P35244 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.62□□□□□ -1.51
RPA3P35244 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.62□□□□□ -1.51
RPA3P35244 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.62□□□□□ -1.51
RPA3P35244 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.62□□□□□ -1.51
RPA3P35244 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RPA3P35244 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RPA3P35244 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RPA3P35244 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.62□□□□□ -1.51
RPA3P35244 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.62□□□□□ -1.51
RPA3P35244 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.62□□□□□ -1.51
RPA3P35244 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
RPA3P35244 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
RPA3P35244 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
RPA3P35244 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RPA3P35244 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.62□□□□□ -1.51
RPA3P35244 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.62□□□□□ -1.51
RPA3P35244 AL358178.1-201ENST00000407698 397 ntBASIC5.62□□□□□ -1.51
RPA3P35244 AL357752.1-201ENST00000412817 349 ntBASIC5.62□□□□□ -1.51
RPA3P35244 AK4P4-201ENST00000419465 646 ntBASIC5.62□□□□□ -1.51
RPA3P35244 HMGN2P27-201ENST00000427352 270 ntBASIC5.62□□□□□ -1.51
RPA3P35244 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
RPA3P35244 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
RPA3P35244 NANOGP9-201ENST00000439890 892 ntBASIC5.62□□□□□ -1.51
RPA3P35244 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.62□□□□□ -1.51
RPA3P35244 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.62□□□□□ -1.51
RPA3P35244 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.62□□□□□ -1.51
RPA3P35244 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.62□□□□□ -1.51
RPA3P35244 NXT1P1-201ENST00000458481 316 ntBASIC5.62□□□□□ -1.51
RPA3P35244 ATP5LP5-201ENST00000483050 299 ntBASIC5.62□□□□□ -1.51
RPA3P35244 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.62□□□□□ -1.51
RPA3P35244 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.62□□□□□ -1.51
RPA3P35244 IGLV3-30-201ENST00000524362 298 ntBASIC5.62□□□□□ -1.51
RPA3P35244 HMGN2P36-201ENST00000529541 409 ntBASIC5.62□□□□□ -1.51
RPA3P35244 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.62□□□□□ -1.51
RPA3P35244 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.62□□□□□ -1.51
RPA3P35244 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.62□□□□□ -1.51
RPA3P35244 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.62□□□□□ -1.51
RPA3P35244 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.62□□□□□ -1.51
RPA3P35244 AL365181.4-201ENST00000609800 547 ntBASIC5.62□□□□□ -1.51
RPA3P35244 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RPA3P35244 MIR1910-201ENST00000636955 80 ntBASIC5.62□□□□□ -1.51
RPA3P35244 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
RPA3P35244 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RPA3P35244 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RPA3P35244 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.62□□□□□ -1.51
RPA3P35244 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
RPA3P35244 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
RPA3P35244 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
RPA3P35244 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
RPA3P35244 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RPA3P35244 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.61□□□□□ -1.51
RPA3P35244 RNA5SP500-201ENST00000364486 119 ntBASIC5.61□□□□□ -1.51
RPA3P35244 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RPA3P35244 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RPA3P35244 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
RPA3P35244 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RPA3P35244 MIR1282-201ENST00000408865 101 ntBASIC5.61□□□□□ -1.51
RPA3P35244 AC245060.4-201ENST00000413293 1121 ntBASIC5.61□□□□□ -1.51
RPA3P35244 MRPL53P1-201ENST00000414323 319 ntBASIC5.61□□□□□ -1.51
RPA3P35244 AKR1B10P1-201ENST00000425765 942 ntBASIC5.61□□□□□ -1.51
RPA3P35244 CDY8P-201ENST00000428380 1279 ntBASIC5.61□□□□□ -1.51
RPA3P35244 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.61□□□□□ -1.51
RPA3P35244 HSPE1P27-201ENST00000430808 296 ntBASIC5.61□□□□□ -1.51
RPA3P35244 SUMO2P8-201ENST00000434672 286 ntBASIC5.61□□□□□ -1.51
RPA3P35244 PCNPP2-201ENST00000441651 455 ntBASIC5.61□□□□□ -1.51
RPA3P35244 CDY20P-201ENST00000447528 1279 ntBASIC5.61□□□□□ -1.51
RPA3P35244 AP006222.1-205ENST00000450734 457 ntBASIC5.61□□□□□ -1.51
RPA3P35244 PSAT1P4-201ENST00000466500 526 ntBASIC5.61□□□□□ -1.51
RPA3P35244 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.61□□□□□ -1.51
RPA3P35244 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.61□□□□□ -1.51
RPA3P35244 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.61□□□□□ -1.51
RPA3P35244 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.61□□□□□ -1.51
RPA3P35244 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.61□□□□□ -1.51
RPA3P35244 SNORA70.11-201ENST00000515987 138 ntBASIC5.61□□□□□ -1.51
RPA3P35244 SNORA70.13-201ENST00000516116 138 ntBASIC5.61□□□□□ -1.51
RPA3P35244 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.61□□□□□ -1.51
RPA3P35244 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.61□□□□□ -1.51
RPA3P35244 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
RPA3P35244 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.61□□□□□ -1.51
RPA3P35244 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RPA3P35244 FRG1EP-201ENST00000634469 770 ntBASIC5.61□□□□□ -1.51
RPA3P35244 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.61□□□□□ -1.51
RPA3P35244 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
RPA3P35244 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RPA3P35244 OR9K1P-202ENST00000641111 3217 ntBASIC5.61□□□□□ -1.51
RPA3P35244 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RPA3P35244 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RPA3P35244 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RPA3P35244 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RPA3P35244 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RPA3P35244 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.6□□□□□ -1.51
RPA3P35244 NCOA4P2-201ENST00000340589 1813 ntBASIC5.6□□□□□ -1.51
RPA3P35244 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms