Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HOXC13P31276 AC053481.2-202ENST00000582394 1500 ntBASIC6.14□□□□□ -1.43
HOXC13P31276 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HOXC13P31276 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
HOXC13P31276 AC007159.1-201ENST00000566529 4706 ntBASIC6.14□□□□□ -1.43
HOXC13P31276 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
HOXC13P31276 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HOXC13P31276 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
HOXC13P31276 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
HOXC13P31276 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
HOXC13P31276 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
HOXC13P31276 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.13□□□□□ -1.43
HOXC13P31276 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
HOXC13P31276 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
HOXC13P31276 AC010266.2-201ENST00000564741 3255 ntBASIC6.13□□□□□ -1.43
HOXC13P31276 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HOXC13P31276 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.13□□□□□ -1.43
HOXC13P31276 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HOXC13P31276 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HOXC13P31276 SNORD1C-201ENST00000363315 78 ntBASIC6.13□□□□□ -1.43
HOXC13P31276 U3.23-201ENST00000391132 200 ntBASIC6.13□□□□□ -1.43
HOXC13P31276 AC016739.1-201ENST00000405359 345 ntBASIC6.13□□□□□ -1.43
HOXC13P31276 OR3A2-201ENST00000408891 1076 ntBASIC6.13□□□□□ -1.43
HOXC13P31276 RN7SKP293-201ENST00000411389 296 ntBASIC6.13□□□□□ -1.43
HOXC13P31276 RPS26P38-201ENST00000414476 348 ntBASIC6.13□□□□□ -1.43
HOXC13P31276 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC6.13□□□□□ -1.43
HOXC13P31276 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.13□□□□□ -1.43
HOXC13P31276 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.13□□□□□ -1.43
HOXC13P31276 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.13□□□□□ -1.43
HOXC13P31276 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.13□□□□□ -1.43
HOXC13P31276 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC6.13□□□□□ -1.43
HOXC13P31276 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC6.13□□□□□ -1.43
HOXC13P31276 SNRPCP3-201ENST00000474888 476 ntBASIC6.13□□□□□ -1.43
HOXC13P31276 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6.13□□□□□ -1.43
HOXC13P31276 WBP1LP3-201ENST00000523033 208 ntBASIC6.13□□□□□ -1.43
HOXC13P31276 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.13□□□□□ -1.43
HOXC13P31276 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.13□□□□□ -1.43
HOXC13P31276 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.13□□□□□ -1.43
HOXC13P31276 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.13□□□□□ -1.43
HOXC13P31276 COX6CP7-201ENST00000597056 208 ntBASIC6.13□□□□□ -1.43
HOXC13P31276 AL021918.2-201ENST00000613415 194 ntBASIC6.13□□□□□ -1.43
HOXC13P31276 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC6.13□□□□□ -1.43
HOXC13P31276 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.13□□□□□ -1.43
HOXC13P31276 WDR75-207ENST00000631047 270 ntTSL 5 BASIC6.13□□□□□ -1.43
HOXC13P31276 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.13□□□□□ -1.43
HOXC13P31276 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.13□□□□□ -1.43
HOXC13P31276 AC019072.1-201ENST00000604535 1551 ntBASIC6.13□□□□□ -1.43
HOXC13P31276 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.13□□□□□ -1.43
HOXC13P31276 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC6.13□□□□□ -1.43
HOXC13P31276 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
HOXC13P31276 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HOXC13P31276 AL662795.2-201ENST00000624252 3706 ntBASIC6.13□□□□□ -1.43
HOXC13P31276 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
HOXC13P31276 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.13□□□□□ -1.43
HOXC13P31276 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.13□□□□□ -1.43
HOXC13P31276 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.12□□□□□ -1.43
HOXC13P31276 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
HOXC13P31276 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.12□□□□□ -1.43
HOXC13P31276 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.12□□□□□ -1.43
HOXC13P31276 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.12□□□□□ -1.43
HOXC13P31276 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
HOXC13P31276 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HOXC13P31276 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HOXC13P31276 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.12□□□□□ -1.43
HOXC13P31276 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HOXC13P31276 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HOXC13P31276 RN7SKP162-201ENST00000363605 345 ntBASIC6.12□□□□□ -1.43
HOXC13P31276 RNA5SP132-201ENST00000364725 118 ntBASIC6.12□□□□□ -1.43
HOXC13P31276 AL451142.1-201ENST00000375867 775 ntBASIC6.12□□□□□ -1.43
HOXC13P31276 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HOXC13P31276 AL662874.1-201ENST00000426065 230 ntBASIC6.12□□□□□ -1.43
HOXC13P31276 AC127526.2-201ENST00000426436 775 ntBASIC6.12□□□□□ -1.43
HOXC13P31276 MTCO1P51-201ENST00000427672 1060 ntBASIC6.12□□□□□ -1.43
HOXC13P31276 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC6.12□□□□□ -1.43
HOXC13P31276 RPS12P17-201ENST00000438591 377 ntBASIC6.12□□□□□ -1.43
HOXC13P31276 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.12□□□□□ -1.43
HOXC13P31276 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HOXC13P31276 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.12□□□□□ -1.43
HOXC13P31276 MTCYBP14-201ENST00000457471 715 ntBASIC6.12□□□□□ -1.43
HOXC13P31276 RPL38P3-201ENST00000484463 213 ntBASIC6.12□□□□□ -1.43
HOXC13P31276 MORF4L2P1-201ENST00000503761 858 ntBASIC6.12□□□□□ -1.43
HOXC13P31276 AC008629.2-201ENST00000503783 483 ntBASIC6.12□□□□□ -1.43
HOXC13P31276 AC074087.1-201ENST00000512059 724 ntBASIC6.12□□□□□ -1.43
HOXC13P31276 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.12□□□□□ -1.43
HOXC13P31276 SNORA26.10-201ENST00000516427 141 ntBASIC6.12□□□□□ -1.43
HOXC13P31276 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.12□□□□□ -1.43
HOXC13P31276 IGKV2-18-201ENST00000522607 343 ntBASIC6.12□□□□□ -1.43
HOXC13P31276 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
HOXC13P31276 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.12□□□□□ -1.43
HOXC13P31276 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.12□□□□□ -1.43
HOXC13P31276 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC6.12□□□□□ -1.43
HOXC13P31276 AL356801.1-201ENST00000559320 294 ntBASIC6.12□□□□□ -1.43
HOXC13P31276 AC010547.6-201ENST00000571789 193 ntBASIC6.12□□□□□ -1.43
HOXC13P31276 MIR1269B-201ENST00000580405 75 ntBASIC6.12□□□□□ -1.43
HOXC13P31276 MIR1273E-201ENST00000581165 102 ntBASIC6.12□□□□□ -1.43
HOXC13P31276 AC005224.3-201ENST00000584683 2140 ntBASIC6.12□□□□□ -1.43
HOXC13P31276 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.12□□□□□ -1.43
HOXC13P31276 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.12□□□□□ -1.43
HOXC13P31276 AL352984.2-202ENST00000613699 155 ntBASIC6.12□□□□□ -1.43
HOXC13P31276 AC003973.3-201ENST00000624863 2822 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms