Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.48□□□□□ -1.53
PTPN6P29350 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PTPN6P29350 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
PTPN6P29350 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTPN6P29350 AC083899.1-201ENST00000454465 3819 ntBASIC5.48□□□□□ -1.53
PTPN6P29350 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTPN6P29350 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.48□□□□□ -1.53
PTPN6P29350 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.47□□□□□ -1.53
PTPN6P29350 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.47□□□□□ -1.53
PTPN6P29350 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PTPN6P29350 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.47□□□□□ -1.53
PTPN6P29350 AF287957.1-201ENST00000607368 1595 ntBASIC5.47□□□□□ -1.53
PTPN6P29350 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PTPN6P29350 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
PTPN6P29350 RN7SKP269-201ENST00000365545 319 ntBASIC5.47□□□□□ -1.53
PTPN6P29350 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.47□□□□□ -1.53
PTPN6P29350 RNA5SP122-201ENST00000384457 108 ntBASIC5.47□□□□□ -1.53
PTPN6P29350 MIR323B-201ENST00000385269 82 ntBASIC5.47□□□□□ -1.53
PTPN6P29350 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
PTPN6P29350 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
PTPN6P29350 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.47□□□□□ -1.53
PTPN6P29350 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC5.47□□□□□ -1.53
PTPN6P29350 RNGTTP1-201ENST00000420965 728 ntBASIC5.47□□□□□ -1.53
PTPN6P29350 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.47□□□□□ -1.53
PTPN6P29350 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.47□□□□□ -1.53
PTPN6P29350 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.47□□□□□ -1.53
PTPN6P29350 AC138761.5-201ENST00000433967 325 ntBASIC5.47□□□□□ -1.53
PTPN6P29350 ARAFP2-201ENST00000440565 559 ntBASIC5.47□□□□□ -1.53
PTPN6P29350 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC5.47□□□□□ -1.53
PTPN6P29350 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.47□□□□□ -1.53
PTPN6P29350 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.47□□□□□ -1.53
PTPN6P29350 SNRPCP3-201ENST00000474888 476 ntBASIC5.47□□□□□ -1.53
PTPN6P29350 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.47□□□□□ -1.53
PTPN6P29350 RN7SL193P-201ENST00000491708 276 ntBASIC5.47□□□□□ -1.53
PTPN6P29350 GLUD1P3-202ENST00000508551 200 ntBASIC5.47□□□□□ -1.53
PTPN6P29350 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.47□□□□□ -1.53
PTPN6P29350 AC021146.10-201ENST00000515628 706 ntBASIC5.47□□□□□ -1.53
PTPN6P29350 Y_RNA.667-201ENST00000516212 107 ntBASIC5.47□□□□□ -1.53
PTPN6P29350 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.47□□□□□ -1.53
PTPN6P29350 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.47□□□□□ -1.53
PTPN6P29350 NANOGNBP2-201ENST00000544753 553 ntBASIC5.47□□□□□ -1.53
PTPN6P29350 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.47□□□□□ -1.53
PTPN6P29350 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
PTPN6P29350 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC5.47□□□□□ -1.53
PTPN6P29350 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.47□□□□□ -1.53
PTPN6P29350 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.47□□□□□ -1.53
PTPN6P29350 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.47□□□□□ -1.53
PTPN6P29350 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.47□□□□□ -1.53
PTPN6P29350 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.47□□□□□ -1.53
PTPN6P29350 MIR6793-201ENST00000612376 63 ntBASIC5.47□□□□□ -1.53
PTPN6P29350 AL096712.1-201ENST00000614561 159 ntBASIC5.47□□□□□ -1.53
PTPN6P29350 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.47□□□□□ -1.53
PTPN6P29350 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PTPN6P29350 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.47□□□□□ -1.53
PTPN6P29350 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PTPN6P29350 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PTPN6P29350 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
PTPN6P29350 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.47□□□□□ -1.53
PTPN6P29350 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PTPN6P29350 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.47□□□□□ -1.53
PTPN6P29350 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PTPN6P29350 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PTPN6P29350 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.46□□□□□ -1.53
PTPN6P29350 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
PTPN6P29350 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.46□□□□□ -1.53
PTPN6P29350 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.53
PTPN6P29350 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
PTPN6P29350 AC109446.4-201ENST00000623235 2755 ntBASIC5.46□□□□□ -1.53
PTPN6P29350 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PTPN6P29350 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PTPN6P29350 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.46□□□□□ -1.54
PTPN6P29350 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PTPN6P29350 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
PTPN6P29350 AC125336.1-201ENST00000508893 2827 ntBASIC5.46□□□□□ -1.54
PTPN6P29350 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.46□□□□□ -1.54
PTPN6P29350 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.46□□□□□ -1.54
PTPN6P29350 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.46□□□□□ -1.54
PTPN6P29350 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.46□□□□□ -1.54
PTPN6P29350 AC092642.1-201ENST00000392417 425 ntBASIC5.46□□□□□ -1.54
PTPN6P29350 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
PTPN6P29350 SNORA79B-201ENST00000410557 148 ntBASIC5.46□□□□□ -1.54
PTPN6P29350 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.46□□□□□ -1.54
PTPN6P29350 AL354890.1-201ENST00000413730 346 ntBASIC5.46□□□□□ -1.54
PTPN6P29350 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.46□□□□□ -1.54
PTPN6P29350 VN1R21P-201ENST00000426703 765 ntBASIC5.46□□□□□ -1.54
PTPN6P29350 TUBB4BP6-201ENST00000437576 479 ntBASIC5.46□□□□□ -1.54
PTPN6P29350 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.46□□□□□ -1.54
PTPN6P29350 VN1R110P-201ENST00000438988 971 ntBASIC5.46□□□□□ -1.54
PTPN6P29350 MED28P3-201ENST00000444288 531 ntBASIC5.46□□□□□ -1.54
PTPN6P29350 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.46□□□□□ -1.54
PTPN6P29350 RNA5SP438-201ENST00000516561 112 ntBASIC5.46□□□□□ -1.54
PTPN6P29350 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.46□□□□□ -1.54
PTPN6P29350 AP004609.2-201ENST00000532177 190 ntBASIC5.46□□□□□ -1.54
PTPN6P29350 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
PTPN6P29350 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.46□□□□□ -1.54
PTPN6P29350 VN1R81P-201ENST00000602085 372 ntBASIC5.46□□□□□ -1.54
PTPN6P29350 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.46□□□□□ -1.54
PTPN6P29350 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.46□□□□□ -1.54
PTPN6P29350 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.46□□□□□ -1.54
PTPN6P29350 AC129915.3-201ENST00000634128 948 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms