Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DQB2P05538 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.6□□□□□ -1.51
HLA-DQB2P05538 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DQB2P05538 AL359715.3-201ENST00000569267 2123 ntBASIC5.6□□□□□ -1.51
HLA-DQB2P05538 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DQB2P05538 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DQB2P05538 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.6□□□□□ -1.51
HLA-DQB2P05538 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DQB2P05538 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DQB2P05538 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.59□□□□□ -1.51
HLA-DQB2P05538 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.59□□□□□ -1.51
HLA-DQB2P05538 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DQB2P05538 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.59□□□□□ -1.51
HLA-DQB2P05538 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.59□□□□□ -1.51
HLA-DQB2P05538 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DQB2P05538 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.59□□□□□ -1.51
HLA-DQB2P05538 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.59□□□□□ -1.51
HLA-DQB2P05538 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DQB2P05538 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
HLA-DQB2P05538 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.59□□□□□ -1.51
HLA-DQB2P05538 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.59□□□□□ -1.51
HLA-DQB2P05538 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DQB2P05538 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DQB2P05538 RN7SKP145-201ENST00000363291 303 ntBASIC5.59□□□□□ -1.51
HLA-DQB2P05538 RN7SKP6-201ENST00000364795 319 ntBASIC5.59□□□□□ -1.51
HLA-DQB2P05538 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
HLA-DQB2P05538 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DQB2P05538 SNORD56.6-201ENST00000384569 71 ntBASIC5.59□□□□□ -1.51
HLA-DQB2P05538 RNU11-201ENST00000387069 134 ntBASIC5.59□□□□□ -1.51
HLA-DQB2P05538 AL133482.1-201ENST00000415988 498 ntBASIC5.59□□□□□ -1.51
HLA-DQB2P05538 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.59□□□□□ -1.51
HLA-DQB2P05538 NDUFB4P8-201ENST00000435351 367 ntBASIC5.59□□□□□ -1.51
HLA-DQB2P05538 MRPS21P3-201ENST00000436696 262 ntBASIC5.59□□□□□ -1.51
HLA-DQB2P05538 AL390119.1-201ENST00000440329 312 ntBASIC5.59□□□□□ -1.51
HLA-DQB2P05538 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.59□□□□□ -1.51
HLA-DQB2P05538 AC023271.1-201ENST00000445936 1090 ntBASIC5.59□□□□□ -1.51
HLA-DQB2P05538 AL451063.1-201ENST00000450164 1133 ntBASIC5.59□□□□□ -1.51
HLA-DQB2P05538 RN7SL197P-201ENST00000466981 299 ntBASIC5.59□□□□□ -1.51
HLA-DQB2P05538 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DQB2P05538 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.59□□□□□ -1.51
HLA-DQB2P05538 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
HLA-DQB2P05538 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.59□□□□□ -1.51
HLA-DQB2P05538 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.59□□□□□ -1.51
HLA-DQB2P05538 AC020978.7-201ENST00000575953 1187 ntBASIC5.59□□□□□ -1.51
HLA-DQB2P05538 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.59□□□□□ -1.51
HLA-DQB2P05538 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
HLA-DQB2P05538 AP000769.2-201ENST00000602344 396 ntBASIC5.59□□□□□ -1.51
HLA-DQB2P05538 AL360012.1-201ENST00000602813 131 ntBASIC5.59□□□□□ -1.51
HLA-DQB2P05538 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.59□□□□□ -1.51
HLA-DQB2P05538 AL512356.3-201ENST00000623005 461 ntBASIC5.59□□□□□ -1.51
HLA-DQB2P05538 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.59□□□□□ -1.51
HLA-DQB2P05538 AP001153.1-201ENST00000641024 338 ntBASIC5.59□□□□□ -1.51
HLA-DQB2P05538 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
HLA-DQB2P05538 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DQB2P05538 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
HLA-DQB2P05538 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DQB2P05538 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.59□□□□□ -1.52
HLA-DQB2P05538 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
HLA-DQB2P05538 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
HLA-DQB2P05538 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
HLA-DQB2P05538 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.58□□□□□ -1.52
HLA-DQB2P05538 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
HLA-DQB2P05538 AL031123.3-201ENST00000623345 1837 ntBASIC5.58□□□□□ -1.52
HLA-DQB2P05538 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DQB2P05538 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.58□□□□□ -1.52
HLA-DQB2P05538 AL049634.1-201ENST00000453770 1720 ntBASIC5.58□□□□□ -1.52
HLA-DQB2P05538 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DQB2P05538 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DQB2P05538 RNA5SP234-201ENST00000363916 119 ntBASIC5.58□□□□□ -1.52
HLA-DQB2P05538 SNORA16A-201ENST00000384342 137 ntBASIC5.58□□□□□ -1.52
HLA-DQB2P05538 SNORA17A-201ENST00000391185 133 ntBASIC5.58□□□□□ -1.52
HLA-DQB2P05538 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.58□□□□□ -1.52
HLA-DQB2P05538 MED28P3-201ENST00000444288 531 ntBASIC5.58□□□□□ -1.52
HLA-DQB2P05538 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.58□□□□□ -1.52
HLA-DQB2P05538 AC091912.1-201ENST00000511351 248 ntBASIC5.58□□□□□ -1.52
HLA-DQB2P05538 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.58□□□□□ -1.52
HLA-DQB2P05538 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.58□□□□□ -1.52
HLA-DQB2P05538 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.58□□□□□ -1.52
HLA-DQB2P05538 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.58□□□□□ -1.52
HLA-DQB2P05538 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.58□□□□□ -1.52
HLA-DQB2P05538 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.58□□□□□ -1.52
HLA-DQB2P05538 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.58□□□□□ -1.52
HLA-DQB2P05538 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.58□□□□□ -1.52
HLA-DQB2P05538 FO393422.1-201ENST00000603908 708 ntBASIC5.58□□□□□ -1.52
HLA-DQB2P05538 AC104695.2-201ENST00000605056 775 ntBASIC5.58□□□□□ -1.52
HLA-DQB2P05538 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.58□□□□□ -1.52
HLA-DQB2P05538 AC026124.2-201ENST00000621847 656 ntBASIC5.58□□□□□ -1.52
HLA-DQB2P05538 AC132068.1-201ENST00000623805 459 ntBASIC5.58□□□□□ -1.52
HLA-DQB2P05538 AC021766.1-201ENST00000624404 741 ntBASIC5.58□□□□□ -1.52
HLA-DQB2P05538 SNORA17.5-201ENST00000630429 132 ntBASIC5.58□□□□□ -1.52
HLA-DQB2P05538 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.58□□□□□ -1.52
HLA-DQB2P05538 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.58□□□□□ -1.52
HLA-DQB2P05538 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DQB2P05538 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DQB2P05538 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.58□□□□□ -1.52
HLA-DQB2P05538 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-DQB2P05538 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.57□□□□□ -1.52
HLA-DQB2P05538 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-DQB2P05538 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-DQB2P05538 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms