Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC8.47□□□□□ -1.05
RNF40O75150 LINC01007-203ENST00000451953 579 ntTSL 4 BASIC8.47□□□□□ -1.05
RNF40O75150 AL109809.3-201ENST00000456875 246 ntBASIC8.47□□□□□ -1.05
RNF40O75150 SSR1-203ENST00000462112 1094 ntTSL 4 BASIC8.47□□□□□ -1.05
RNF40O75150 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC8.47□□□□□ -1.05
RNF40O75150 RN7SL445P-201ENST00000495609 293 ntBASIC8.47□□□□□ -1.05
RNF40O75150 CC2D2A-205ENST00000503658 605 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
RNF40O75150 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC8.47□□□□□ -1.05
RNF40O75150 LINC02121-201ENST00000507950 432 ntTSL 2 BASIC8.47□□□□□ -1.05
RNF40O75150 AC022695.2-201ENST00000518042 768 ntTSL 3 BASIC8.47□□□□□ -1.05
RNF40O75150 KCTD9P6-201ENST00000522306 950 ntBASIC8.47□□□□□ -1.05
RNF40O75150 OR4A45P-201ENST00000529954 901 ntBASIC8.47□□□□□ -1.05
RNF40O75150 AC073913.2-201ENST00000541512 145 ntBASIC8.47□□□□□ -1.05
RNF40O75150 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC8.47□□□□□ -1.05
RNF40O75150 ACTN1-AS1-201ENST00000553944 484 ntTSL 3 BASIC8.47□□□□□ -1.05
RNF40O75150 DNAJC8P1-201ENST00000554535 372 ntBASIC8.47□□□□□ -1.05
RNF40O75150 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC8.47□□□□□ -1.05
RNF40O75150 WDR61-205ENST00000558459 884 ntTSL 3 BASIC8.47□□□□□ -1.05
RNF40O75150 AC104046.1-201ENST00000559487 406 ntBASIC8.47□□□□□ -1.05
RNF40O75150 AC087393.3-201ENST00000584971 166 ntBASIC8.47□□□□□ -1.05
RNF40O75150 LINC00674-202ENST00000590734 160 ntBASIC8.47□□□□□ -1.05
RNF40O75150 AC073534.1-201ENST00000598671 1056 ntBASIC8.47□□□□□ -1.05
RNF40O75150 BMS1P7-201ENST00000602440 1052 ntBASIC8.47□□□□□ -1.05
RNF40O75150 SNX29P2-204ENST00000603801 875 ntBASIC8.47□□□□□ -1.05
RNF40O75150 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC8.47□□□□□ -1.05
RNF40O75150 AC012640.3-201ENST00000607847 430 ntBASIC8.47□□□□□ -1.05
RNF40O75150 AC019193.3-201ENST00000609144 554 ntBASIC8.47□□□□□ -1.05
RNF40O75150 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC8.47□□□□□ -1.05
RNF40O75150 AC084876.1-201ENST00000612793 641 ntBASIC8.47□□□□□ -1.05
RNF40O75150 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC8.47□□□□□ -1.05
RNF40O75150 AC106875.2-201ENST00000617634 596 ntTSL 2 BASIC8.47□□□□□ -1.05
RNF40O75150 MIR8089-201ENST00000620165 82 ntBASIC8.47□□□□□ -1.05
RNF40O75150 AC090971.5-201ENST00000621102 293 ntBASIC8.47□□□□□ -1.05
RNF40O75150 AC241377.2-202ENST00000636462 997 ntBASIC8.47□□□□□ -1.05
RNF40O75150 AC241585.4-201ENST00000640951 686 ntBASIC8.47□□□□□ -1.05
RNF40O75150 CYCS-201ENST00000305786 4098 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
RNF40O75150 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC8.47□□□□□ -1.05
RNF40O75150 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
RNF40O75150 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC8.47□□□□□ -1.05
RNF40O75150 ZFP42-203ENST00000618147 2338 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
RNF40O75150 INSIG2-201ENST00000245787 2590 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
RNF40O75150 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
RNF40O75150 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
RNF40O75150 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC8.47□□□□□ -1.05
RNF40O75150 ZNF37BP-203ENST00000452306 1352 ntBASIC8.47□□□□□ -1.05
RNF40O75150 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
RNF40O75150 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC8.47□□□□□ -1.05
RNF40O75150 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
RNF40O75150 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
RNF40O75150 LGSN-201ENST00000370657 1949 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
RNF40O75150 ZNF667-206ENST00000591790 5250 ntTSL 2 BASIC8.46□□□□□ -1.05
RNF40O75150 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
RNF40O75150 TRHR-202ENST00000518632 1660 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
RNF40O75150 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
RNF40O75150 SALL1P1-201ENST00000438101 3837 ntBASIC8.46□□□□□ -1.05
RNF40O75150 MAP4-209ENST00000434267 2772 ntTSL 2 BASIC8.46□□□□□ -1.05
RNF40O75150 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC8.46□□□□□ -1.05
RNF40O75150 AC006511.3-201ENST00000624929 1783 ntBASIC8.46□□□□□ -1.05
RNF40O75150 MSANTD3-TMEFF1-201ENST00000502978 2069 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.05
RNF40O75150 KIT-201ENST00000288135 5186 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
RNF40O75150 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
RNF40O75150 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
RNF40O75150 KCNIP2-202ENST00000343195 663 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
RNF40O75150 RNU6-451P-201ENST00000362921 107 ntBASIC8.46□□□□□ -1.06
RNF40O75150 Y_RNA.97-201ENST00000363094 102 ntBASIC8.46□□□□□ -1.06
RNF40O75150 RN7SKP48-201ENST00000365031 328 ntBASIC8.46□□□□□ -1.06
RNF40O75150 Y_RNA.315-201ENST00000365117 102 ntBASIC8.46□□□□□ -1.06
RNF40O75150 AAMDC-202ENST00000393427 531 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
RNF40O75150 RNU2-39P-201ENST00000410604 198 ntBASIC8.46□□□□□ -1.06
RNF40O75150 POLR1B-204ENST00000417433 3836 ntTSL 2 BASIC8.46□□□□□ -1.06
RNF40O75150 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
RNF40O75150 RPS27AP14-201ENST00000422868 454 ntBASIC8.46□□□□□ -1.06
RNF40O75150 AKR1B15-201ENST00000423958 1035 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
RNF40O75150 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC8.46□□□□□ -1.06
RNF40O75150 MYO5BP3-201ENST00000431872 1279 ntBASIC8.46□□□□□ -1.06
RNF40O75150 NPM1P18-201ENST00000434232 732 ntBASIC8.46□□□□□ -1.06
RNF40O75150 AL049646.2-201ENST00000436848 258 ntTSL 2 BASIC8.46□□□□□ -1.06
RNF40O75150 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC8.46□□□□□ -1.06
RNF40O75150 AC097499.1-201ENST00000444277 208 ntBASIC8.46□□□□□ -1.06
RNF40O75150 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
RNF40O75150 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC8.46□□□□□ -1.06
RNF40O75150 LINC00265-202ENST00000448955 468 ntTSL 2 BASIC8.46□□□□□ -1.06
RNF40O75150 Y_RNA.639-201ENST00000458981 102 ntBASIC8.46□□□□□ -1.06
RNF40O75150 AP005202.1-201ENST00000489915 867 ntBASIC8.46□□□□□ -1.06
RNF40O75150 AC117422.1-201ENST00000508263 379 ntTSL 3 BASIC8.46□□□□□ -1.06
RNF40O75150 ENPP7P3-201ENST00000509123 241 ntBASIC8.46□□□□□ -1.06
RNF40O75150 AF186996.3-201ENST00000509527 964 ntBASIC8.46□□□□□ -1.06
RNF40O75150 LINC01094-206ENST00000514130 594 ntTSL 4 BASIC8.46□□□□□ -1.06
RNF40O75150 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC8.46□□□□□ -1.06
RNF40O75150 AC239860.2-201ENST00000525886 270 ntBASIC8.46□□□□□ -1.06
RNF40O75150 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC8.46□□□□□ -1.06
RNF40O75150 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC8.46□□□□□ -1.06
RNF40O75150 AP000435.1-201ENST00000528539 496 ntBASIC8.46□□□□□ -1.06
RNF40O75150 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC8.46□□□□□ -1.06
RNF40O75150 AC004241.1-203ENST00000552502 460 ntTSL 3 BASIC8.46□□□□□ -1.06
RNF40O75150 AC004817.2-201ENST00000561794 651 ntBASIC8.46□□□□□ -1.06
RNF40O75150 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC8.46□□□□□ -1.06
RNF40O75150 MIR4793-201ENST00000577502 87 ntBASIC8.46□□□□□ -1.06
RNF40O75150 MIR5697-201ENST00000578045 78 ntBASIC8.46□□□□□ -1.06
RNF40O75150 MIR3714-201ENST00000579507 65 ntBASIC8.46□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 152.8 ms