Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
FOXN3O00409 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.39
FOXN3O00409 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.4□□□□□ -1.39
FOXN3O00409 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC6.39□□□□□ -1.39
FOXN3O00409 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
FOXN3O00409 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
FOXN3O00409 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
FOXN3O00409 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.39□□□□□ -1.39
FOXN3O00409 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
FOXN3O00409 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
FOXN3O00409 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.39□□□□□ -1.39
FOXN3O00409 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
FOXN3O00409 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
FOXN3O00409 AL391422.1-201ENST00000402155 436 ntBASIC6.39□□□□□ -1.39
FOXN3O00409 AL096711.1-201ENST00000404780 554 ntBASIC6.39□□□□□ -1.39
FOXN3O00409 SNRPEP6-201ENST00000407465 277 ntBASIC6.39□□□□□ -1.39
FOXN3O00409 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.39□□□□□ -1.39
FOXN3O00409 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.39□□□□□ -1.39
FOXN3O00409 MRPL50P1-201ENST00000431951 384 ntBASIC6.39□□□□□ -1.39
FOXN3O00409 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC6.39□□□□□ -1.39
FOXN3O00409 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC6.39□□□□□ -1.39
FOXN3O00409 RPL5P7-201ENST00000444235 813 ntBASIC6.39□□□□□ -1.39
FOXN3O00409 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC6.39□□□□□ -1.39
FOXN3O00409 HMGN1P5-201ENST00000448591 263 ntBASIC6.39□□□□□ -1.39
FOXN3O00409 AC104164.1-201ENST00000460282 590 ntBASIC6.39□□□□□ -1.39
FOXN3O00409 AL603882.1-201ENST00000463059 681 ntBASIC6.39□□□□□ -1.39
FOXN3O00409 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
FOXN3O00409 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
FOXN3O00409 AC092349.1-201ENST00000504903 310 ntBASIC6.39□□□□□ -1.39
FOXN3O00409 RN7SKP157-201ENST00000516174 282 ntBASIC6.39□□□□□ -1.39
FOXN3O00409 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.39□□□□□ -1.39
FOXN3O00409 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC6.39□□□□□ -1.39
FOXN3O00409 AC022826.1-201ENST00000519383 805 ntBASIC6.39□□□□□ -1.39
FOXN3O00409 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.39□□□□□ -1.39
FOXN3O00409 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.39□□□□□ -1.39
FOXN3O00409 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC6.39□□□□□ -1.39
FOXN3O00409 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
FOXN3O00409 UBTFL9-201ENST00000534504 1148 ntBASIC6.39□□□□□ -1.39
FOXN3O00409 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.39□□□□□ -1.39
FOXN3O00409 AP005119.1-201ENST00000580956 292 ntBASIC6.39□□□□□ -1.39
FOXN3O00409 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.39□□□□□ -1.39
FOXN3O00409 OR1AB1P-201ENST00000585564 761 ntBASIC6.39□□□□□ -1.39
FOXN3O00409 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC6.39□□□□□ -1.39
FOXN3O00409 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.39□□□□□ -1.39
FOXN3O00409 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
FOXN3O00409 AP003117.1-201ENST00000602771 554 ntBASIC6.39□□□□□ -1.39
FOXN3O00409 AC018645.2-201ENST00000609151 472 ntBASIC6.39□□□□□ -1.39
FOXN3O00409 AL355816.2-201ENST00000610049 647 ntBASIC6.39□□□□□ -1.39
FOXN3O00409 AC095038.2-201ENST00000621464 1070 ntBASIC6.39□□□□□ -1.39
FOXN3O00409 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
FOXN3O00409 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
FOXN3O00409 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
FOXN3O00409 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.39□□□□□ -1.39
FOXN3O00409 AL354854.1-201ENST00000455940 1363 ntBASIC6.39□□□□□ -1.39
FOXN3O00409 PPBPP2-201ENST00000513150 1362 ntBASIC6.39□□□□□ -1.39
FOXN3O00409 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
FOXN3O00409 AP005432.1-201ENST00000580891 3485 ntBASIC6.39□□□□□ -1.39
FOXN3O00409 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
FOXN3O00409 AC093297.3-201ENST00000607056 2517 ntBASIC6.39□□□□□ -1.39
FOXN3O00409 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
FOXN3O00409 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
FOXN3O00409 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
FOXN3O00409 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
FOXN3O00409 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
FOXN3O00409 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
FOXN3O00409 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
FOXN3O00409 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.38□□□□□ -1.39
FOXN3O00409 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
FOXN3O00409 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
FOXN3O00409 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
FOXN3O00409 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
FOXN3O00409 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
FOXN3O00409 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
FOXN3O00409 RNU6-792P-201ENST00000363490 107 ntBASIC6.38□□□□□ -1.39
FOXN3O00409 RNA5SP211-201ENST00000365516 117 ntBASIC6.38□□□□□ -1.39
FOXN3O00409 STAT4-203ENST00000409995 709 ntTSL 5 BASIC6.38□□□□□ -1.39
FOXN3O00409 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC6.38□□□□□ -1.39
FOXN3O00409 MTND4LP13-201ENST00000425022 298 ntBASIC6.38□□□□□ -1.39
FOXN3O00409 AC245884.2-201ENST00000426257 404 ntBASIC6.38□□□□□ -1.39
FOXN3O00409 AC096632.2-201ENST00000438139 1239 ntBASIC6.38□□□□□ -1.39
FOXN3O00409 RPS7P3-201ENST00000443360 580 ntBASIC6.38□□□□□ -1.39
FOXN3O00409 CYCSP51-201ENST00000443545 318 ntBASIC6.38□□□□□ -1.39
FOXN3O00409 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.38□□□□□ -1.39
FOXN3O00409 YRDCP3-201ENST00000456507 480 ntBASIC6.38□□□□□ -1.39
FOXN3O00409 RN7SL269P-201ENST00000467795 305 ntBASIC6.38□□□□□ -1.39
FOXN3O00409 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
FOXN3O00409 AC021006.1-201ENST00000489849 553 ntBASIC6.38□□□□□ -1.39
FOXN3O00409 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC6.38□□□□□ -1.39
FOXN3O00409 AL158068.1-201ENST00000506116 616 ntBASIC6.38□□□□□ -1.39
FOXN3O00409 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC6.38□□□□□ -1.39
FOXN3O00409 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.38□□□□□ -1.39
FOXN3O00409 snoU109.5-201ENST00000516231 132 ntBASIC6.38□□□□□ -1.39
FOXN3O00409 IGKV3D-25-201ENST00000519599 235 ntBASIC6.38□□□□□ -1.39
FOXN3O00409 MTND5P21-201ENST00000531961 522 ntBASIC6.38□□□□□ -1.39
FOXN3O00409 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.38□□□□□ -1.39
FOXN3O00409 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.38□□□□□ -1.39
FOXN3O00409 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.38□□□□□ -1.39
FOXN3O00409 NPM1P42-201ENST00000560329 862 ntBASIC6.38□□□□□ -1.39
FOXN3O00409 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC6.38□□□□□ -1.39
FOXN3O00409 AC092332.1-201ENST00000563684 829 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms