Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 RNA5SP287-201ENST00000516358 103 ntBASIC9.78□□□□□ -0.84
RTN4Q9NQC3 LINC01499-202ENST00000529282 563 ntTSL 4 BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 LINC01499-203ENST00000530379 555 ntTSL 4 BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 AC007861.1-201ENST00000576671 674 ntTSL 5 BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 AC005262.1-201ENST00000588562 362 ntBASIC9.78□□□□□ -0.84
RTN4Q9NQC3 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 AC011477.1-201ENST00000591884 544 ntTSL 5 BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 TEX26-AS1-217ENST00000593246 797 ntTSL 5 BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 MIR6892-201ENST00000612346 115 ntBASIC9.78□□□□□ -0.84
RTN4Q9NQC3 Y_RNA.804-201ENST00000615262 101 ntBASIC9.78□□□□□ -0.84
RTN4Q9NQC3 AL590491.1-202ENST00000618038 394 ntBASIC9.78□□□□□ -0.84
RTN4Q9NQC3 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 CASC19-212ENST00000641153 1287 ntBASIC9.78□□□□□ -0.84
RTN4Q9NQC3 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 PYHIN1-202ENST00000368138 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 PSG9-204ENST00000418820 1748 ntTSL 5 BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 EEF1A1P42-201ENST00000613436 1331 ntBASIC9.78□□□□□ -0.84
RTN4Q9NQC3 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 MYRFL-205ENST00000552032 3139 ntAPPRIS P2 TSL 5 BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 FANCB-201ENST00000324138 2894 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
RTN4Q9NQC3 PLAG1-202ENST00000423799 1684 ntTSL 2 BASIC9.77□□□□□ -0.84
RTN4Q9NQC3 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
RTN4Q9NQC3 MTND4P29-201ENST00000503122 1372 ntBASIC9.77□□□□□ -0.84
RTN4Q9NQC3 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC9.77□□□□□ -0.84
RTN4Q9NQC3 NCALD-203ENST00000395923 3808 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.84
RTN4Q9NQC3 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC9.77□□□□□ -0.84
RTN4Q9NQC3 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
RTN4Q9NQC3 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
RTN4Q9NQC3 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
RTN4Q9NQC3 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC9.77□□□□□ -0.85
RTN4Q9NQC3 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
RTN4Q9NQC3 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
RTN4Q9NQC3 RPL7A-201ENST00000315731 680 ntTSL 2 BASIC9.77□□□□□ -0.85
RTN4Q9NQC3 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
RTN4Q9NQC3 RNA5SP394-201ENST00000364216 119 ntBASIC9.77□□□□□ -0.85
RTN4Q9NQC3 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
RTN4Q9NQC3 AC008171.1-201ENST00000395058 200 ntBASIC9.77□□□□□ -0.85
RTN4Q9NQC3 FGFR1OP2P1-201ENST00000395943 500 ntBASIC9.77□□□□□ -0.85
RTN4Q9NQC3 AL590286.1-201ENST00000404178 291 ntBASIC9.77□□□□□ -0.85
RTN4Q9NQC3 RNU6-603P-201ENST00000411403 107 ntBASIC9.77□□□□□ -0.85
RTN4Q9NQC3 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC9.77□□□□□ -0.85
RTN4Q9NQC3 AL591806.1-201ENST00000447167 1109 ntTSL 3 BASIC9.77□□□□□ -0.85
RTN4Q9NQC3 NDUFA5P3-201ENST00000449348 345 ntBASIC9.77□□□□□ -0.85
RTN4Q9NQC3 HNRNPA3P2-201ENST00000451198 662 ntBASIC9.77□□□□□ -0.85
RTN4Q9NQC3 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC9.77□□□□□ -0.85
RTN4Q9NQC3 AL356310.1-201ENST00000452024 585 ntTSL 3 BASIC9.77□□□□□ -0.85
RTN4Q9NQC3 RN7SL566P-201ENST00000467650 296 ntBASIC9.77□□□□□ -0.85
RTN4Q9NQC3 AC112719.1-201ENST00000477971 315 ntBASIC9.77□□□□□ -0.85
RTN4Q9NQC3 ATP5LP5-201ENST00000483050 299 ntBASIC9.77□□□□□ -0.85
RTN4Q9NQC3 LEMD1-208ENST00000495594 637 ntTSL 3 BASIC9.77□□□□□ -0.85
RTN4Q9NQC3 AC044787.1-201ENST00000497325 792 ntBASIC9.77□□□□□ -0.85
RTN4Q9NQC3 RNF138P1-201ENST00000502765 546 ntBASIC9.77□□□□□ -0.85
RTN4Q9NQC3 FTH1P24-201ENST00000503502 462 ntBASIC9.77□□□□□ -0.85
RTN4Q9NQC3 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC9.77□□□□□ -0.85
RTN4Q9NQC3 AC008638.2-201ENST00000503840 715 ntBASIC9.77□□□□□ -0.85
RTN4Q9NQC3 RACK1-225ENST00000511566 825 ntTSL 3 BASIC9.77□□□□□ -0.85
RTN4Q9NQC3 DKK2-204ENST00000513208 925 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
RTN4Q9NQC3 AC093677.1-201ENST00000514414 678 ntBASIC9.77□□□□□ -0.85
RTN4Q9NQC3 IGKV2-14-201ENST00000517571 347 ntBASIC9.77□□□□□ -0.85
RTN4Q9NQC3 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC9.77□□□□□ -0.85
RTN4Q9NQC3 DCAF13-203ENST00000519682 837 ntTSL 2 BASIC9.77□□□□□ -0.85
RTN4Q9NQC3 AC084251.1-201ENST00000521867 382 ntBASIC9.77□□□□□ -0.85
RTN4Q9NQC3 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC9.77□□□□□ -0.85
RTN4Q9NQC3 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC9.77□□□□□ -0.85
RTN4Q9NQC3 AC090616.5-202ENST00000582111 297 ntBASIC9.77□□□□□ -0.85
RTN4Q9NQC3 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC9.77□□□□□ -0.85
RTN4Q9NQC3 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC9.77□□□□□ -0.85
RTN4Q9NQC3 IGKV2D-29-202ENST00000612356 310 ntBASIC9.77□□□□□ -0.85
RTN4Q9NQC3 AC023310.4-201ENST00000613130 650 ntBASIC9.77□□□□□ -0.85
RTN4Q9NQC3 AC004009.2-201ENST00000623016 728 ntBASIC9.77□□□□□ -0.85
RTN4Q9NQC3 AC022140.2-201ENST00000623500 188 ntBASIC9.77□□□□□ -0.85
RTN4Q9NQC3 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC9.77□□□□□ -0.85
RTN4Q9NQC3 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC9.77□□□□□ -0.85
RTN4Q9NQC3 NUDT13-203ENST00000372997 1919 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
RTN4Q9NQC3 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
RTN4Q9NQC3 AC123769.2-201ENST00000624332 5984 ntBASIC9.77□□□□□ -0.85
RTN4Q9NQC3 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC9.77□□□□□ -0.85
RTN4Q9NQC3 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
RTN4Q9NQC3 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
RTN4Q9NQC3 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
RTN4Q9NQC3 KCNMB3P1-202ENST00000493696 3389 ntBASIC9.77□□□□□ -0.85
RTN4Q9NQC3 CR786580.1-201ENST00000417843 2878 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
RTN4Q9NQC3 LINC01410-201ENST00000424345 2877 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
RTN4Q9NQC3 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
RTN4Q9NQC3 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
RTN4Q9NQC3 ST7-212ENST00000422922 1887 ntTSL 5 BASIC9.76□□□□□ -0.85
RTN4Q9NQC3 AC091305.2-201ENST00000624049 1576 ntBASIC9.76□□□□□ -0.85
RTN4Q9NQC3 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC9.76□□□□□ -0.85
RTN4Q9NQC3 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
RTN4Q9NQC3 GNL2P1-201ENST00000451274 2190 ntBASIC9.76□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms