Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 UBFD1P1-201ENST00000473259 814 ntBASIC6.89□□□□□ -1.31
VTA1Q9NP79 UBE2V1P12-201ENST00000503954 474 ntBASIC6.89□□□□□ -1.31
VTA1Q9NP79 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.89□□□□□ -1.31
VTA1Q9NP79 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.89□□□□□ -1.31
VTA1Q9NP79 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.89□□□□□ -1.31
VTA1Q9NP79 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC6.89□□□□□ -1.31
VTA1Q9NP79 AC087894.1-201ENST00000538359 518 ntBASIC6.89□□□□□ -1.31
VTA1Q9NP79 MTND1P24-201ENST00000552175 861 ntBASIC6.89□□□□□ -1.31
VTA1Q9NP79 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.89□□□□□ -1.31
VTA1Q9NP79 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.89□□□□□ -1.31
VTA1Q9NP79 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.89□□□□□ -1.31
VTA1Q9NP79 MIR4776-2-201ENST00000580204 80 ntBASIC6.89□□□□□ -1.31
VTA1Q9NP79 EIF1P5-201ENST00000585002 234 ntBASIC6.89□□□□□ -1.31
VTA1Q9NP79 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC6.89□□□□□ -1.31
VTA1Q9NP79 AC091057.3-201ENST00000602684 733 ntBASIC6.89□□□□□ -1.31
VTA1Q9NP79 AL137067.2-201ENST00000621202 131 ntBASIC6.89□□□□□ -1.31
VTA1Q9NP79 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.89□□□□□ -1.31
VTA1Q9NP79 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC6.89□□□□□ -1.31
VTA1Q9NP79 FRG1DP-201ENST00000635586 771 ntBASIC6.89□□□□□ -1.31
VTA1Q9NP79 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
VTA1Q9NP79 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
VTA1Q9NP79 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
VTA1Q9NP79 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
VTA1Q9NP79 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
VTA1Q9NP79 MTCO1P11-201ENST00000429111 1528 ntBASIC6.89□□□□□ -1.31
VTA1Q9NP79 BIN2P1-201ENST00000504996 1530 ntBASIC6.89□□□□□ -1.31
VTA1Q9NP79 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.89□□□□□ -1.31
VTA1Q9NP79 AC027088.4-201ENST00000611559 1947 ntBASIC6.89□□□□□ -1.31
VTA1Q9NP79 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
VTA1Q9NP79 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.89□□□□□ -1.31
VTA1Q9NP79 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
VTA1Q9NP79 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
VTA1Q9NP79 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
VTA1Q9NP79 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
VTA1Q9NP79 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
VTA1Q9NP79 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.88□□□□□ -1.31
VTA1Q9NP79 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
VTA1Q9NP79 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.88□□□□□ -1.31
VTA1Q9NP79 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
VTA1Q9NP79 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.88□□□□□ -1.31
VTA1Q9NP79 AC012254.3-201ENST00000591183 2117 ntBASIC6.88□□□□□ -1.31
VTA1Q9NP79 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.88□□□□□ -1.31
VTA1Q9NP79 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.88□□□□□ -1.31
VTA1Q9NP79 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
VTA1Q9NP79 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
VTA1Q9NP79 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
VTA1Q9NP79 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.88□□□□□ -1.31
VTA1Q9NP79 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
VTA1Q9NP79 RPS3AP2-201ENST00000407190 754 ntBASIC6.88□□□□□ -1.31
VTA1Q9NP79 RPL35AP3-201ENST00000414680 288 ntBASIC6.88□□□□□ -1.31
VTA1Q9NP79 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.88□□□□□ -1.31
VTA1Q9NP79 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.88□□□□□ -1.31
VTA1Q9NP79 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
VTA1Q9NP79 RPS15AP30-201ENST00000420976 390 ntBASIC6.88□□□□□ -1.31
VTA1Q9NP79 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC6.88□□□□□ -1.31
VTA1Q9NP79 AL512661.1-201ENST00000434586 1253 ntBASIC6.88□□□□□ -1.31
VTA1Q9NP79 RNFT1P2-201ENST00000443064 757 ntBASIC6.88□□□□□ -1.31
VTA1Q9NP79 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.88□□□□□ -1.31
VTA1Q9NP79 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.88□□□□□ -1.31
VTA1Q9NP79 AL022319.1-201ENST00000458183 1167 ntBASIC6.88□□□□□ -1.31
VTA1Q9NP79 AC008410.1-201ENST00000483777 339 ntBASIC6.88□□□□□ -1.31
VTA1Q9NP79 WDR78-207ENST00000488333 613 ntTSL 3 BASIC6.88□□□□□ -1.31
VTA1Q9NP79 AC021087.2-201ENST00000504656 1203 ntBASIC6.88□□□□□ -1.31
VTA1Q9NP79 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC6.88□□□□□ -1.31
VTA1Q9NP79 NPM1P21-201ENST00000513394 762 ntBASIC6.88□□□□□ -1.31
VTA1Q9NP79 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC6.88□□□□□ -1.31
VTA1Q9NP79 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC6.88□□□□□ -1.31
VTA1Q9NP79 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
VTA1Q9NP79 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
VTA1Q9NP79 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.88□□□□□ -1.31
VTA1Q9NP79 OOSP1P2-201ENST00000579644 351 ntBASIC6.88□□□□□ -1.31
VTA1Q9NP79 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC6.88□□□□□ -1.31
VTA1Q9NP79 AC079880.2-201ENST00000603790 1213 ntBASIC6.88□□□□□ -1.31
VTA1Q9NP79 RNU6-1192P-201ENST00000612197 107 ntBASIC6.88□□□□□ -1.31
VTA1Q9NP79 RNU6-489P-201ENST00000618289 107 ntBASIC6.88□□□□□ -1.31
VTA1Q9NP79 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
VTA1Q9NP79 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
VTA1Q9NP79 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.88□□□□□ -1.31
VTA1Q9NP79 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
VTA1Q9NP79 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
VTA1Q9NP79 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
VTA1Q9NP79 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
VTA1Q9NP79 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.87□□□□□ -1.31
VTA1Q9NP79 AL078595.2-201ENST00000605309 1780 ntBASIC6.87□□□□□ -1.31
VTA1Q9NP79 OR13C1P-202ENST00000641378 2919 ntBASIC6.87□□□□□ -1.31
VTA1Q9NP79 UGT2B24P-201ENST00000514441 1597 ntBASIC6.87□□□□□ -1.31
VTA1Q9NP79 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.87□□□□□ -1.31
VTA1Q9NP79 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
VTA1Q9NP79 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
VTA1Q9NP79 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
VTA1Q9NP79 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
VTA1Q9NP79 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
VTA1Q9NP79 ZNF402P-201ENST00000404435 3100 ntBASIC6.87□□□□□ -1.31
VTA1Q9NP79 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
VTA1Q9NP79 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
VTA1Q9NP79 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
VTA1Q9NP79 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.87□□□□□ -1.31
VTA1Q9NP79 FUNDC2P3-201ENST00000334716 533 ntBASIC6.87□□□□□ -1.31
VTA1Q9NP79 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.87□□□□□ -1.31
VTA1Q9NP79 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms