Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
AP1S3Q96PC3 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
AP1S3Q96PC3 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
AP1S3Q96PC3 RNU1-136P-201ENST00000384181 164 ntBASIC4.23□□□□□ -1.73
AP1S3Q96PC3 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
AP1S3Q96PC3 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
AP1S3Q96PC3 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC4.23□□□□□ -1.73
AP1S3Q96PC3 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC4.23□□□□□ -1.73
AP1S3Q96PC3 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC4.23□□□□□ -1.73
AP1S3Q96PC3 GAPDHP19-201ENST00000431768 1005 ntBASIC4.23□□□□□ -1.73
AP1S3Q96PC3 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.23□□□□□ -1.73
AP1S3Q96PC3 AL359265.1-201ENST00000440296 795 ntBASIC4.23□□□□□ -1.73
AP1S3Q96PC3 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC4.23□□□□□ -1.73
AP1S3Q96PC3 FTLP8-201ENST00000446770 267 ntBASIC4.23□□□□□ -1.73
AP1S3Q96PC3 RPS18P1-201ENST00000447840 458 ntBASIC4.23□□□□□ -1.73
AP1S3Q96PC3 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC4.23□□□□□ -1.73
AP1S3Q96PC3 AC004129.2-201ENST00000457229 287 ntBASIC4.23□□□□□ -1.73
AP1S3Q96PC3 RN7SL393P-201ENST00000463588 296 ntBASIC4.23□□□□□ -1.73
AP1S3Q96PC3 AP000942.1-201ENST00000463969 747 ntBASIC4.23□□□□□ -1.73
AP1S3Q96PC3 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC4.23□□□□□ -1.73
AP1S3Q96PC3 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC4.23□□□□□ -1.73
AP1S3Q96PC3 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC4.23□□□□□ -1.73
AP1S3Q96PC3 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC4.23□□□□□ -1.73
AP1S3Q96PC3 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC4.23□□□□□ -1.73
AP1S3Q96PC3 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC4.23□□□□□ -1.73
AP1S3Q96PC3 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC4.23□□□□□ -1.73
AP1S3Q96PC3 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
AP1S3Q96PC3 AC027796.1-201ENST00000575593 512 ntBASIC4.23□□□□□ -1.73
AP1S3Q96PC3 AC006120.1-201ENST00000579375 546 ntBASIC4.23□□□□□ -1.73
AP1S3Q96PC3 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC4.23□□□□□ -1.73
AP1S3Q96PC3 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC4.23□□□□□ -1.73
AP1S3Q96PC3 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC4.23□□□□□ -1.73
AP1S3Q96PC3 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC4.23□□□□□ -1.73
AP1S3Q96PC3 RFPL4AP6-201ENST00000616792 846 ntBASIC4.23□□□□□ -1.73
AP1S3Q96PC3 AC073488.3-201ENST00000631611 778 ntBASIC4.23□□□□□ -1.73
AP1S3Q96PC3 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
AP1S3Q96PC3 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
AP1S3Q96PC3 AC011933.2-201ENST00000578539 2790 ntBASIC4.23□□□□□ -1.73
AP1S3Q96PC3 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
AP1S3Q96PC3 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC4.23□□□□□ -1.73
AP1S3Q96PC3 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
AP1S3Q96PC3 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
AP1S3Q96PC3 AC011447.7-201ENST00000624228 1590 ntBASIC4.23□□□□□ -1.73
AP1S3Q96PC3 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
AP1S3Q96PC3 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
AP1S3Q96PC3 AC012254.3-201ENST00000591183 2117 ntBASIC4.22□□□□□ -1.73
AP1S3Q96PC3 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.22□□□□□ -1.73
AP1S3Q96PC3 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
AP1S3Q96PC3 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
AP1S3Q96PC3 AC011503.2-201ENST00000594230 1500 ntBASIC4.22□□□□□ -1.73
AP1S3Q96PC3 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC4.22□□□□□ -1.73
AP1S3Q96PC3 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
AP1S3Q96PC3 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
AP1S3Q96PC3 RNU1-146P-201ENST00000364015 165 ntBASIC4.22□□□□□ -1.73
AP1S3Q96PC3 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
AP1S3Q96PC3 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC4.22□□□□□ -1.73
AP1S3Q96PC3 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
AP1S3Q96PC3 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
AP1S3Q96PC3 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
AP1S3Q96PC3 AC211486.3-201ENST00000412694 621 ntBASIC4.22□□□□□ -1.73
AP1S3Q96PC3 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC4.22□□□□□ -1.73
AP1S3Q96PC3 RPS4XP5-201ENST00000419038 768 ntBASIC4.22□□□□□ -1.73
AP1S3Q96PC3 MYB-206ENST00000420123 1051 ntTSL 5 BASIC4.22□□□□□ -1.73
AP1S3Q96PC3 AC092646.1-201ENST00000427142 901 ntBASIC4.22□□□□□ -1.73
AP1S3Q96PC3 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.22□□□□□ -1.73
AP1S3Q96PC3 AC023141.8-201ENST00000442554 208 ntBASIC4.22□□□□□ -1.73
AP1S3Q96PC3 AL031681.1-201ENST00000443304 400 ntBASIC4.22□□□□□ -1.73
AP1S3Q96PC3 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC4.22□□□□□ -1.73
AP1S3Q96PC3 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC4.22□□□□□ -1.73
AP1S3Q96PC3 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC4.22□□□□□ -1.73
AP1S3Q96PC3 AC023245.1-201ENST00000468501 517 ntBASIC4.22□□□□□ -1.73
AP1S3Q96PC3 AC090589.1-201ENST00000473109 362 ntBASIC4.22□□□□□ -1.73
AP1S3Q96PC3 AC020779.1-201ENST00000478757 796 ntBASIC4.22□□□□□ -1.73
AP1S3Q96PC3 AC135999.1-201ENST00000478962 479 ntBASIC4.22□□□□□ -1.73
AP1S3Q96PC3 RPL21P6-201ENST00000479171 504 ntBASIC4.22□□□□□ -1.73
AP1S3Q96PC3 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.22□□□□□ -1.73
AP1S3Q96PC3 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC4.22□□□□□ -1.73
AP1S3Q96PC3 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.22□□□□□ -1.73
AP1S3Q96PC3 OSTC-204ENST00000512478 663 ntTSL 5 BASIC4.22□□□□□ -1.73
AP1S3Q96PC3 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC4.22□□□□□ -1.73
AP1S3Q96PC3 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC4.22□□□□□ -1.73
AP1S3Q96PC3 CR383658.1-201ENST00000514609 734 ntBASIC4.22□□□□□ -1.73
AP1S3Q96PC3 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC4.22□□□□□ -1.73
AP1S3Q96PC3 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.22□□□□□ -1.73
AP1S3Q96PC3 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC4.22□□□□□ -1.73
AP1S3Q96PC3 STARD6-202ENST00000577499 696 ntTSL 2 BASIC4.22□□□□□ -1.73
AP1S3Q96PC3 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC4.22□□□□□ -1.73
AP1S3Q96PC3 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC4.22□□□□□ -1.73
AP1S3Q96PC3 AL078624.2-201ENST00000605063 554 ntBASIC4.22□□□□□ -1.73
AP1S3Q96PC3 IGKV2OR2-1-201ENST00000605129 304 ntBASIC4.22□□□□□ -1.73
AP1S3Q96PC3 RPSAP75-201ENST00000605848 301 ntBASIC4.22□□□□□ -1.73
AP1S3Q96PC3 AC068726.1-201ENST00000610993 341 ntBASIC4.22□□□□□ -1.73
AP1S3Q96PC3 AL122023.1-201ENST00000622847 530 ntBASIC4.22□□□□□ -1.73
AP1S3Q96PC3 TMEM30CP-203ENST00000637814 1035 ntBASIC4.22□□□□□ -1.73
AP1S3Q96PC3 ATM-229ENST00000639953 587 ntTSL 5 BASIC4.22□□□□□ -1.73
AP1S3Q96PC3 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
AP1S3Q96PC3 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
AP1S3Q96PC3 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
AP1S3Q96PC3 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.22□□□□□ -1.73
AP1S3Q96PC3 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms