Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.55□□□□□ -1.52
TM9SF4Q92544 AL121839.2-201ENST00000565058 6943 ntBASIC5.55□□□□□ -1.52
TM9SF4Q92544 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.55□□□□□ -1.52
TM9SF4Q92544 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.55□□□□□ -1.52
TM9SF4Q92544 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TM9SF4Q92544 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
TM9SF4Q92544 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TM9SF4Q92544 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TM9SF4Q92544 RN7SKP128-201ENST00000364270 303 ntBASIC5.55□□□□□ -1.52
TM9SF4Q92544 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.55□□□□□ -1.52
TM9SF4Q92544 SNRPEP6-201ENST00000407465 277 ntBASIC5.55□□□□□ -1.52
TM9SF4Q92544 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.55□□□□□ -1.52
TM9SF4Q92544 RN7SKP17-201ENST00000411242 351 ntBASIC5.55□□□□□ -1.52
TM9SF4Q92544 ZNF92P1Y-201ENST00000415010 1191 ntBASIC5.55□□□□□ -1.52
TM9SF4Q92544 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TM9SF4Q92544 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.55□□□□□ -1.52
TM9SF4Q92544 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.55□□□□□ -1.52
TM9SF4Q92544 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.55□□□□□ -1.52
TM9SF4Q92544 AL731534.1-201ENST00000434711 269 ntBASIC5.55□□□□□ -1.52
TM9SF4Q92544 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.55□□□□□ -1.52
TM9SF4Q92544 GAPDHP48-201ENST00000436626 961 ntBASIC5.55□□□□□ -1.52
TM9SF4Q92544 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC5.55□□□□□ -1.52
TM9SF4Q92544 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.55□□□□□ -1.52
TM9SF4Q92544 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.55□□□□□ -1.52
TM9SF4Q92544 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TM9SF4Q92544 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.55□□□□□ -1.52
TM9SF4Q92544 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.55□□□□□ -1.52
TM9SF4Q92544 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.55□□□□□ -1.52
TM9SF4Q92544 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.55□□□□□ -1.52
TM9SF4Q92544 AC073594.1-201ENST00000462065 364 ntBASIC5.55□□□□□ -1.52
TM9SF4Q92544 RN7SL177P-201ENST00000476596 299 ntBASIC5.55□□□□□ -1.52
TM9SF4Q92544 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.55□□□□□ -1.52
TM9SF4Q92544 AC099521.1-201ENST00000482557 334 ntBASIC5.55□□□□□ -1.52
TM9SF4Q92544 AL133372.1-201ENST00000493565 745 ntBASIC5.55□□□□□ -1.52
TM9SF4Q92544 AP001960.1-201ENST00000506494 658 ntBASIC5.55□□□□□ -1.52
TM9SF4Q92544 OR6M2P-201ENST00000529831 871 ntBASIC5.55□□□□□ -1.52
TM9SF4Q92544 AC244502.2-201ENST00000543361 851 ntBASIC5.55□□□□□ -1.52
TM9SF4Q92544 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.55□□□□□ -1.52
TM9SF4Q92544 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.55□□□□□ -1.52
TM9SF4Q92544 AC135626.1-201ENST00000556983 435 ntBASIC5.55□□□□□ -1.52
TM9SF4Q92544 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.55□□□□□ -1.52
TM9SF4Q92544 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC5.55□□□□□ -1.52
TM9SF4Q92544 AP000919.1-201ENST00000582850 985 ntBASIC5.55□□□□□ -1.52
TM9SF4Q92544 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.55□□□□□ -1.52
TM9SF4Q92544 FAM72A-208ENST00000607379 1139 ntBASIC5.55□□□□□ -1.52
TM9SF4Q92544 AC003001.2-201ENST00000616294 831 ntBASIC5.55□□□□□ -1.52
TM9SF4Q92544 AC020923.1-201ENST00000624021 917 ntBASIC5.55□□□□□ -1.52
TM9SF4Q92544 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TM9SF4Q92544 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
TM9SF4Q92544 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.55□□□□□ -1.52
TM9SF4Q92544 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TM9SF4Q92544 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
TM9SF4Q92544 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.55□□□□□ -1.52
TM9SF4Q92544 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TM9SF4Q92544 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TM9SF4Q92544 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TM9SF4Q92544 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
TM9SF4Q92544 OR13C1P-202ENST00000641378 2919 ntBASIC5.54□□□□□ -1.52
TM9SF4Q92544 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.54□□□□□ -1.52
TM9SF4Q92544 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.54□□□□□ -1.52
TM9SF4Q92544 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TM9SF4Q92544 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.54□□□□□ -1.52
TM9SF4Q92544 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
TM9SF4Q92544 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TM9SF4Q92544 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TM9SF4Q92544 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
TM9SF4Q92544 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TM9SF4Q92544 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.54□□□□□ -1.52
TM9SF4Q92544 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.54□□□□□ -1.52
TM9SF4Q92544 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
TM9SF4Q92544 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.54□□□□□ -1.52
TM9SF4Q92544 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.54□□□□□ -1.52
TM9SF4Q92544 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.54□□□□□ -1.52
TM9SF4Q92544 U3.25-201ENST00000391209 220 ntBASIC5.54□□□□□ -1.52
TM9SF4Q92544 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.54□□□□□ -1.52
TM9SF4Q92544 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.54□□□□□ -1.52
TM9SF4Q92544 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.54□□□□□ -1.52
TM9SF4Q92544 AC126120.1-201ENST00000431082 470 ntBASIC5.54□□□□□ -1.52
TM9SF4Q92544 BMS1P10-201ENST00000443754 1120 ntBASIC5.54□□□□□ -1.52
TM9SF4Q92544 AL513343.1-201ENST00000451818 792 ntBASIC5.54□□□□□ -1.52
TM9SF4Q92544 TPRKBP1-201ENST00000456243 481 ntBASIC5.54□□□□□ -1.52
TM9SF4Q92544 RN7SL57P-201ENST00000493687 290 ntBASIC5.54□□□□□ -1.52
TM9SF4Q92544 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.54□□□□□ -1.52
TM9SF4Q92544 AC113398.2-201ENST00000507630 558 ntBASIC5.54□□□□□ -1.52
TM9SF4Q92544 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.54□□□□□ -1.52
TM9SF4Q92544 AC109481.1-201ENST00000509173 282 ntBASIC5.54□□□□□ -1.52
TM9SF4Q92544 SNORD116-30-201ENST00000516468 85 ntBASIC5.54□□□□□ -1.52
TM9SF4Q92544 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.54□□□□□ -1.52
TM9SF4Q92544 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC5.54□□□□□ -1.52
TM9SF4Q92544 AC010547.6-201ENST00000571789 193 ntBASIC5.54□□□□□ -1.52
TM9SF4Q92544 AC020978.7-201ENST00000575953 1187 ntBASIC5.54□□□□□ -1.52
TM9SF4Q92544 MIR132-201ENST00000591554 101 ntBASIC5.54□□□□□ -1.52
TM9SF4Q92544 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.54□□□□□ -1.52
TM9SF4Q92544 AC025857.2-201ENST00000602711 238 ntBASIC5.54□□□□□ -1.52
TM9SF4Q92544 RNA5SP440-201ENST00000612665 119 ntBASIC5.54□□□□□ -1.52
TM9SF4Q92544 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC5.54□□□□□ -1.52
TM9SF4Q92544 AC241377.1-201ENST00000619797 406 ntBASIC5.54□□□□□ -1.52
TM9SF4Q92544 AL137067.2-201ENST00000621202 131 ntBASIC5.54□□□□□ -1.52
TM9SF4Q92544 AL691477.1-201ENST00000624398 162 ntBASIC5.54□□□□□ -1.52
TM9SF4Q92544 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms