Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ATG4AQ8WYN0 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 METTL5-202ENST00000308099 629 ntTSL 3 BASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 MRPS21P3-201ENST00000436696 262 ntBASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 MTND2P6-201ENST00000455337 1030 ntBASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 AC004890.1-201ENST00000461005 181 ntBASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 AC079080.1-201ENST00000479841 822 ntBASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 AC008629.2-201ENST00000503783 483 ntBASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 AC096571.1-202ENST00000506634 735 ntBASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 NACAP5-201ENST00000509863 636 ntBASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 MTND2P32-201ENST00000521584 1038 ntBASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 AC092868.3-201ENST00000560515 784 ntBASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 TXNP4-201ENST00000575018 310 ntBASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 MIR4701-201ENST00000583094 63 ntBASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 AC060780.2-201ENST00000589047 198 ntBASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 AC023762.1-201ENST00000603280 584 ntBASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 AC112220.2-201ENST00000605513 533 ntBASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 AC078880.4-201ENST00000617627 1749 ntBASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 AL138693.1-201ENST00000622219 129 ntBASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 AC068787.1-201ENST00000623908 691 ntBASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 AC009135.2-201ENST00000624136 1768 ntBASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ATG4AQ8WYN0 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 MTCO1P28-201ENST00000574177 1528 ntBASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 ST13P16-201ENST00000401760 781 ntBASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 RPL7AP51-201ENST00000422016 760 ntBASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 AC130360.1-201ENST00000425489 1117 ntBASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 RPS26P4-201ENST00000431743 355 ntBASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 AC004129.2-201ENST00000457229 287 ntBASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 AC106822.1-201ENST00000502647 526 ntBASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 RNA5SP441-201ENST00000516809 88 ntBASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 AP003355.1-201ENST00000518956 587 ntBASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 AC130365.2-201ENST00000525882 1201 ntBASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 OR7E13P-201ENST00000526052 910 ntBASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 AC006115.2-201ENST00000596823 202 ntBASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 AL021918.2-201ENST00000613415 194 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms