Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 ATP5A1P1-201ENST00000454088 1321 ntBASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 AC133552.1-201ENST00000569988 4007 ntBASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 U3.7-201ENST00000363668 216 ntBASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 PSMA6P1-201ENST00000400275 741 ntBASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 SETP15-201ENST00000412724 337 ntBASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 OR6C64P-201ENST00000419708 825 ntBASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 PTP4A1P1-201ENST00000420539 515 ntBASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 AC128677.1-201ENST00000436016 442 ntBASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 AL031681.1-201ENST00000443304 400 ntBASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 BMS1P10-201ENST00000443754 1120 ntBASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 MTND4LP12-201ENST00000448237 295 ntBASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 NXT1P1-201ENST00000458481 316 ntBASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 SEPT14P1-201ENST00000458703 648 ntBASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 RPS4XP12-201ENST00000461747 709 ntBASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 AC104849.1-201ENST00000462623 405 ntBASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 RN7SL393P-201ENST00000463588 296 ntBASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 RN7SL790P-201ENST00000474043 298 ntBASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 AP002453.1-201ENST00000492327 668 ntBASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 AC093890.1-201ENST00000502554 540 ntBASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 AC074255.1-201ENST00000511259 501 ntBASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 RNU6-943P-201ENST00000516960 98 ntBASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 CASP5-209ENST00000531367 879 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 AC139697.1-201ENST00000548429 745 ntBASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 NMNAT1P5-201ENST00000559657 841 ntBASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 AC084759.1-201ENST00000561168 290 ntBASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 AP002884.5-201ENST00000595053 1132 ntBASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 AC092681.3-201ENST00000609463 678 ntBASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 AC010632.3-201ENST00000611377 369 ntBASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 SMG1P7-201ENST00000565246 2704 ntBASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 MFSD8-219ENST00000641228 2559 ntBASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC71LQ8N9Z2 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 AC097461.1-201ENST00000568928 2821 ntBASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 SELENOWP1-201ENST00000322792 252 ntBASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 MIR27A-201ENST00000385073 78 ntBASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 VDAC2P1-201ENST00000399358 958 ntBASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 AC233289.1-201ENST00000403700 508 ntBASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 AC016739.1-201ENST00000405359 345 ntBASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 AL358178.1-201ENST00000407698 397 ntBASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 EIF5AP4-201ENST00000441206 465 ntBASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 HMGN1P32-201ENST00000441744 256 ntBASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 WDR82P2-201ENST00000444540 928 ntBASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 AL157777.1-201ENST00000468100 304 ntBASIC4.73□□□□□ -1.65
CCDC71LQ8N9Z2 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms