Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.07□□□□□ -1.6
LRRC28Q86X40 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.07□□□□□ -1.6
LRRC28Q86X40 MIR4310-201ENST00000582950 57 ntBASIC5.07□□□□□ -1.6
LRRC28Q86X40 FAM72A-208ENST00000607379 1139 ntBASIC5.07□□□□□ -1.6
LRRC28Q86X40 AC108673.3-201ENST00000609183 335 ntBASIC5.07□□□□□ -1.6
LRRC28Q86X40 AC010632.3-201ENST00000611377 369 ntBASIC5.07□□□□□ -1.6
LRRC28Q86X40 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.07□□□□□ -1.6
LRRC28Q86X40 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.07□□□□□ -1.6
LRRC28Q86X40 AL359742.1-201ENST00000622497 540 ntBASIC5.07□□□□□ -1.6
LRRC28Q86X40 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.07□□□□□ -1.6
LRRC28Q86X40 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
LRRC28Q86X40 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
LRRC28Q86X40 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LRRC28Q86X40 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.07□□□□□ -1.6
LRRC28Q86X40 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
LRRC28Q86X40 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.07□□□□□ -1.6
LRRC28Q86X40 PSG10P-201ENST00000501199 1500 ntBASIC5.07□□□□□ -1.6
LRRC28Q86X40 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.07□□□□□ -1.6
LRRC28Q86X40 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LRRC28Q86X40 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.06□□□□□ -1.6
LRRC28Q86X40 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
LRRC28Q86X40 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.06□□□□□ -1.6
LRRC28Q86X40 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.06□□□□□ -1.6
LRRC28Q86X40 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
LRRC28Q86X40 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
LRRC28Q86X40 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.06□□□□□ -1.6
LRRC28Q86X40 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.06□□□□□ -1.6
LRRC28Q86X40 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.06□□□□□ -1.6
LRRC28Q86X40 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LRRC28Q86X40 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
LRRC28Q86X40 RNFT1P3-201ENST00000340898 1052 ntBASIC5.06□□□□□ -1.6
LRRC28Q86X40 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.06□□□□□ -1.6
LRRC28Q86X40 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.06□□□□□ -1.6
LRRC28Q86X40 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
LRRC28Q86X40 SUGT1P2-201ENST00000379452 992 ntBASIC5.06□□□□□ -1.6
LRRC28Q86X40 HYALP1-201ENST00000417674 1279 ntBASIC5.06□□□□□ -1.6
LRRC28Q86X40 AL121878.1-201ENST00000418638 859 ntBASIC5.06□□□□□ -1.6
LRRC28Q86X40 VN1R3-201ENST00000418822 919 ntBASIC5.06□□□□□ -1.6
LRRC28Q86X40 AC066692.1-201ENST00000421721 457 ntBASIC5.06□□□□□ -1.6
LRRC28Q86X40 AC079807.1-201ENST00000429993 481 ntBASIC5.06□□□□□ -1.6
LRRC28Q86X40 TUBB4BP6-201ENST00000437576 479 ntBASIC5.06□□□□□ -1.6
LRRC28Q86X40 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.06□□□□□ -1.6
LRRC28Q86X40 VN1R110P-201ENST00000438988 971 ntBASIC5.06□□□□□ -1.6
LRRC28Q86X40 AL445466.1-201ENST00000448432 357 ntBASIC5.06□□□□□ -1.6
LRRC28Q86X40 GAPDHP14-201ENST00000450472 937 ntBASIC5.06□□□□□ -1.6
LRRC28Q86X40 MEMO1P4-201ENST00000453590 386 ntBASIC5.06□□□□□ -1.6
LRRC28Q86X40 CST12P-201ENST00000457644 362 ntBASIC5.06□□□□□ -1.6
LRRC28Q86X40 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.06□□□□□ -1.6
LRRC28Q86X40 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.06□□□□□ -1.6
LRRC28Q86X40 AC110056.1-201ENST00000525759 911 ntBASIC5.06□□□□□ -1.6
LRRC28Q86X40 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
LRRC28Q86X40 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.06□□□□□ -1.6
LRRC28Q86X40 NANOGNBP2-201ENST00000544753 553 ntBASIC5.06□□□□□ -1.6
LRRC28Q86X40 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.06□□□□□ -1.6
LRRC28Q86X40 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.06□□□□□ -1.6
LRRC28Q86X40 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.06□□□□□ -1.6
LRRC28Q86X40 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.06□□□□□ -1.6
LRRC28Q86X40 MIR7853-201ENST00000584820 132 ntBASIC5.06□□□□□ -1.6
LRRC28Q86X40 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.06□□□□□ -1.6
LRRC28Q86X40 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.06□□□□□ -1.6
LRRC28Q86X40 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.06□□□□□ -1.6
LRRC28Q86X40 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.06□□□□□ -1.6
LRRC28Q86X40 AL139124.1-201ENST00000609123 421 ntBASIC5.06□□□□□ -1.6
LRRC28Q86X40 MIR6793-201ENST00000612376 63 ntBASIC5.06□□□□□ -1.6
LRRC28Q86X40 AL096712.1-201ENST00000614561 159 ntBASIC5.06□□□□□ -1.6
LRRC28Q86X40 AL136228.1-201ENST00000622221 319 ntBASIC5.06□□□□□ -1.6
LRRC28Q86X40 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.06□□□□□ -1.6
LRRC28Q86X40 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LRRC28Q86X40 AC119674.1-202ENST00000641333 1860 ntBASIC5.06□□□□□ -1.6
LRRC28Q86X40 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
LRRC28Q86X40 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LRRC28Q86X40 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.06□□□□□ -1.6
LRRC28Q86X40 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
LRRC28Q86X40 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.06□□□□□ -1.6
LRRC28Q86X40 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
LRRC28Q86X40 AC003985.2-201ENST00000562268 1669 ntBASIC5.05□□□□□ -1.6
LRRC28Q86X40 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LRRC28Q86X40 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.05□□□□□ -1.6
LRRC28Q86X40 AC083899.1-201ENST00000454465 3819 ntBASIC5.05□□□□□ -1.6
LRRC28Q86X40 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LRRC28Q86X40 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LRRC28Q86X40 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LRRC28Q86X40 AC012254.3-201ENST00000591183 2117 ntBASIC5.05□□□□□ -1.6
LRRC28Q86X40 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.05□□□□□ -1.6
LRRC28Q86X40 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
LRRC28Q86X40 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.05□□□□□ -1.6
LRRC28Q86X40 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
LRRC28Q86X40 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LRRC28Q86X40 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
LRRC28Q86X40 AC023490.2-201ENST00000359859 470 ntBASIC5.05□□□□□ -1.6
LRRC28Q86X40 RN7SKP15-201ENST00000364742 309 ntBASIC5.05□□□□□ -1.6
LRRC28Q86X40 U3.28-201ENST00000391249 210 ntBASIC5.05□□□□□ -1.6
LRRC28Q86X40 AC096921.1-201ENST00000411661 375 ntBASIC5.05□□□□□ -1.6
LRRC28Q86X40 GNG5P5-201ENST00000420444 220 ntBASIC5.05□□□□□ -1.6
LRRC28Q86X40 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.05□□□□□ -1.6
LRRC28Q86X40 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
LRRC28Q86X40 AC144530.1-201ENST00000452862 555 ntBASIC5.05□□□□□ -1.6
LRRC28Q86X40 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.05□□□□□ -1.6
LRRC28Q86X40 AC004129.2-201ENST00000457229 287 ntBASIC5.05□□□□□ -1.6
LRRC28Q86X40 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms