Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 FAM32BP-201ENST00000344033 333 ntBASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 RNA5SP435-201ENST00000364044 108 ntBASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 RNU6-1320P-201ENST00000390838 107 ntBASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 RNU6-1269P-201ENST00000391139 107 ntBASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 AC004386.1-201ENST00000393214 761 ntBASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 AL157702.1-201ENST00000398764 426 ntBASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 AL049697.3-201ENST00000406493 982 ntBASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 MED6P1-201ENST00000439659 713 ntBASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 RPL34P26-201ENST00000445636 354 ntBASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 OR2AF1P-201ENST00000454899 889 ntBASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 RNU6-599P-201ENST00000459383 107 ntBASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 RNU6-1193P-201ENST00000459461 107 ntBASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 AP002453.1-201ENST00000492327 668 ntBASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 AC131392.1-201ENST00000506490 633 ntBASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 ASNSP4-201ENST00000511103 447 ntBASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 MAL2-205ENST00000521048 575 ntTSL 4 BASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 MYL2-203ENST00000548438 664 ntTSL 3 BASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 AP001437.1-201ENST00000608783 456 ntBASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 AP004607.9-201ENST00000618202 316 ntBASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 RNU6-368P-201ENST00000620928 107 ntBASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 RNU6-538P-201ENST00000622329 107 ntBASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 AC119674.1-212ENST00000641155 993 ntBASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 AC008691.1-209ENST00000642094 814 ntBASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 BTK-209ENST00000618050 2417 ntTSL 5 BASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 ING3-204ENST00000431467 1447 ntTSL 2 BASIC7.34□□□□□ -1.23
CCDC144BQ3MJ40 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
CCDC144BQ3MJ40 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC7.34□□□□□ -1.24
CCDC144BQ3MJ40 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC7.34□□□□□ -1.24
CCDC144BQ3MJ40 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC7.33□□□□□ -1.24
CCDC144BQ3MJ40 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC7.33□□□□□ -1.24
CCDC144BQ3MJ40 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CCDC144BQ3MJ40 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
CCDC144BQ3MJ40 AC104297.1-201ENST00000393779 870 ntBASIC7.33□□□□□ -1.24
CCDC144BQ3MJ40 RN7SKP108-201ENST00000411367 328 ntBASIC7.33□□□□□ -1.24
CCDC144BQ3MJ40 LIPT1P1-201ENST00000415870 1186 ntBASIC7.33□□□□□ -1.24
CCDC144BQ3MJ40 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC7.33□□□□□ -1.24
CCDC144BQ3MJ40 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC7.33□□□□□ -1.24
CCDC144BQ3MJ40 SETP9-201ENST00000423837 832 ntBASIC7.33□□□□□ -1.24
CCDC144BQ3MJ40 RPL7AP14-201ENST00000424041 802 ntBASIC7.33□□□□□ -1.24
CCDC144BQ3MJ40 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC7.33□□□□□ -1.24
CCDC144BQ3MJ40 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC7.33□□□□□ -1.24
CCDC144BQ3MJ40 FO393419.3-201ENST00000428741 282 ntBASIC7.33□□□□□ -1.24
CCDC144BQ3MJ40 RPS29P14-201ENST00000431518 171 ntBASIC7.33□□□□□ -1.24
CCDC144BQ3MJ40 PNKDP1-201ENST00000435914 430 ntBASIC7.33□□□□□ -1.24
CCDC144BQ3MJ40 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC7.33□□□□□ -1.24
CCDC144BQ3MJ40 AL161722.1-201ENST00000446972 1032 ntBASIC7.33□□□□□ -1.24
CCDC144BQ3MJ40 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC7.33□□□□□ -1.24
CCDC144BQ3MJ40 RN7SL221P-201ENST00000466190 281 ntBASIC7.33□□□□□ -1.24
CCDC144BQ3MJ40 EIF1P7-201ENST00000487533 337 ntBASIC7.33□□□□□ -1.24
CCDC144BQ3MJ40 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC7.33□□□□□ -1.24
CCDC144BQ3MJ40 AC083906.1-201ENST00000509298 406 ntBASIC7.33□□□□□ -1.24
CCDC144BQ3MJ40 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC7.33□□□□□ -1.24
CCDC144BQ3MJ40 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC7.33□□□□□ -1.24
CCDC144BQ3MJ40 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC7.33□□□□□ -1.24
CCDC144BQ3MJ40 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
CCDC144BQ3MJ40 AC034205.1-201ENST00000520621 638 ntBASIC7.33□□□□□ -1.24
CCDC144BQ3MJ40 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC7.33□□□□□ -1.24
CCDC144BQ3MJ40 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC7.33□□□□□ -1.24
CCDC144BQ3MJ40 AL109741.3-201ENST00000561748 592 ntBASIC7.33□□□□□ -1.24
CCDC144BQ3MJ40 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC7.33□□□□□ -1.24
CCDC144BQ3MJ40 CYCSP41-201ENST00000616920 296 ntBASIC7.33□□□□□ -1.24
CCDC144BQ3MJ40 AC097520.1-201ENST00000624435 385 ntBASIC7.33□□□□□ -1.24
CCDC144BQ3MJ40 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC7.33□□□□□ -1.24
CCDC144BQ3MJ40 UOX-205ENST00000640983 544 ntTSL 4 BASIC7.33□□□□□ -1.24
CCDC144BQ3MJ40 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC7.33□□□□□ -1.24
CCDC144BQ3MJ40 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC7.33□□□□□ -1.24
CCDC144BQ3MJ40 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CCDC144BQ3MJ40 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CCDC144BQ3MJ40 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CCDC144BQ3MJ40 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CCDC144BQ3MJ40 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CCDC144BQ3MJ40 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC7.33□□□□□ -1.24
CCDC144BQ3MJ40 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC7.33□□□□□ -1.24
CCDC144BQ3MJ40 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms