Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 NANOGP9-201ENST00000439890 892 ntBASIC6.56□□□□□ -1.36
GABPAQ06546 CNOT7P2-201ENST00000441051 832 ntBASIC6.56□□□□□ -1.36
GABPAQ06546 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.56□□□□□ -1.36
GABPAQ06546 RN7SL515P-201ENST00000463999 297 ntBASIC6.56□□□□□ -1.36
GABPAQ06546 RN7SL51P-201ENST00000468230 285 ntBASIC6.56□□□□□ -1.36
GABPAQ06546 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.56□□□□□ -1.36
GABPAQ06546 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC6.56□□□□□ -1.36
GABPAQ06546 AC137627.1-201ENST00000545761 289 ntBASIC6.56□□□□□ -1.36
GABPAQ06546 BLZF2P-201ENST00000553776 1130 ntBASIC6.56□□□□□ -1.36
GABPAQ06546 AC016769.4-201ENST00000616893 535 ntBASIC6.56□□□□□ -1.36
GABPAQ06546 AC018445.2-201ENST00000622987 260 ntBASIC6.56□□□□□ -1.36
GABPAQ06546 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
GABPAQ06546 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
GABPAQ06546 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
GABPAQ06546 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.56□□□□□ -1.36
GABPAQ06546 AL591135.1-201ENST00000401578 5914 ntBASIC6.56□□□□□ -1.36
GABPAQ06546 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
GABPAQ06546 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
GABPAQ06546 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
GABPAQ06546 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
GABPAQ06546 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
GABPAQ06546 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
GABPAQ06546 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.55□□□□□ -1.36
GABPAQ06546 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
GABPAQ06546 AL117378.2-201ENST00000622916 1337 ntBASIC6.55□□□□□ -1.36
GABPAQ06546 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.55□□□□□ -1.36
GABPAQ06546 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
GABPAQ06546 AL592429.1-201ENST00000403909 1473 ntBASIC6.55□□□□□ -1.36
GABPAQ06546 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
GABPAQ06546 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
GABPAQ06546 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.55□□□□□ -1.36
GABPAQ06546 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
GABPAQ06546 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
GABPAQ06546 SNORA16A-201ENST00000384342 137 ntBASIC6.55□□□□□ -1.36
GABPAQ06546 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC6.55□□□□□ -1.36
GABPAQ06546 Z93019.1-201ENST00000416450 973 ntBASIC6.55□□□□□ -1.36
GABPAQ06546 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC6.55□□□□□ -1.36
GABPAQ06546 PRUNEP1-201ENST00000425846 705 ntBASIC6.55□□□□□ -1.36
GABPAQ06546 RPL7L1P9-201ENST00000431298 745 ntBASIC6.55□□□□□ -1.36
GABPAQ06546 AL627308.1-201ENST00000435693 821 ntBASIC6.55□□□□□ -1.36
GABPAQ06546 KRT8P51-201ENST00000438938 274 ntBASIC6.55□□□□□ -1.36
GABPAQ06546 AC092106.1-201ENST00000444291 373 ntBASIC6.55□□□□□ -1.36
GABPAQ06546 CSNK1A1P3-201ENST00000504105 330 ntBASIC6.55□□□□□ -1.36
GABPAQ06546 AC093763.2-201ENST00000505334 1223 ntBASIC6.55□□□□□ -1.36
GABPAQ06546 AC051619.2-201ENST00000559063 397 ntBASIC6.55□□□□□ -1.36
GABPAQ06546 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC6.55□□□□□ -1.36
GABPAQ06546 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
GABPAQ06546 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.55□□□□□ -1.36
GABPAQ06546 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.55□□□□□ -1.36
GABPAQ06546 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.55□□□□□ -1.36
GABPAQ06546 AL034374.2-201ENST00000605281 548 ntBASIC6.55□□□□□ -1.36
GABPAQ06546 AL512329.2-201ENST00000607350 548 ntBASIC6.55□□□□□ -1.36
GABPAQ06546 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
GABPAQ06546 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.55□□□□□ -1.36
GABPAQ06546 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
GABPAQ06546 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.55□□□□□ -1.36
GABPAQ06546 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
GABPAQ06546 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
GABPAQ06546 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
GABPAQ06546 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
GABPAQ06546 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.55□□□□□ -1.36
GABPAQ06546 AC137056.2-201ENST00000624055 1958 ntBASIC6.55□□□□□ -1.36
GABPAQ06546 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
GABPAQ06546 AC109780.1-201ENST00000451768 1344 ntBASIC6.54□□□□□ -1.36
GABPAQ06546 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
GABPAQ06546 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
GABPAQ06546 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
GABPAQ06546 MIR133B-201ENST00000362210 119 ntBASIC6.54□□□□□ -1.36
GABPAQ06546 U3.2-201ENST00000362981 210 ntBASIC6.54□□□□□ -1.36
GABPAQ06546 U3.7-201ENST00000363668 216 ntBASIC6.54□□□□□ -1.36
GABPAQ06546 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
GABPAQ06546 RNU1-77P-201ENST00000390868 162 ntBASIC6.54□□□□□ -1.36
GABPAQ06546 AC092651.1-201ENST00000426110 312 ntBASIC6.54□□□□□ -1.36
GABPAQ06546 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC6.54□□□□□ -1.36
GABPAQ06546 RPSAP41-201ENST00000439695 860 ntBASIC6.54□□□□□ -1.36
GABPAQ06546 AC114982.2-201ENST00000461396 358 ntBASIC6.54□□□□□ -1.36
GABPAQ06546 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.54□□□□□ -1.36
GABPAQ06546 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
GABPAQ06546 RPS4XP1-201ENST00000482189 787 ntBASIC6.54□□□□□ -1.36
GABPAQ06546 AC008953.1-201ENST00000497334 318 ntBASIC6.54□□□□□ -1.36
GABPAQ06546 RPEP1-201ENST00000504507 658 ntBASIC6.54□□□□□ -1.36
GABPAQ06546 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.54□□□□□ -1.36
GABPAQ06546 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.54□□□□□ -1.36
GABPAQ06546 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.54□□□□□ -1.36
GABPAQ06546 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC6.54□□□□□ -1.36
GABPAQ06546 NPM1P42-201ENST00000560329 862 ntBASIC6.54□□□□□ -1.36
GABPAQ06546 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.54□□□□□ -1.36
GABPAQ06546 CCT5-215ENST00000625723 135 ntTSL 5 BASIC6.54□□□□□ -1.36
GABPAQ06546 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.54□□□□□ -1.36
GABPAQ06546 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
GABPAQ06546 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
GABPAQ06546 AC011933.2-201ENST00000578539 2790 ntBASIC6.54□□□□□ -1.36
GABPAQ06546 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
GABPAQ06546 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
GABPAQ06546 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
GABPAQ06546 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
GABPAQ06546 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
GABPAQ06546 AC093829.1-201ENST00000506662 1618 ntBASIC6.54□□□□□ -1.36
GABPAQ06546 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
GABPAQ06546 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms