Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LMO4P61968 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LMO4P61968 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LMO4P61968 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LMO4P61968 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
LMO4P61968 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LMO4P61968 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LMO4P61968 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LMO4P61968 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
LMO4P61968 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
LMO4P61968 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LMO4P61968 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LMO4P61968 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC4.74□□□□□ -1.65
LMO4P61968 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.74□□□□□ -1.65
LMO4P61968 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LMO4P61968 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC4.74□□□□□ -1.65
LMO4P61968 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LMO4P61968 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
LMO4P61968 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LMO4P61968 AL121835.1-201ENST00000404250 354 ntBASIC4.74□□□□□ -1.65
LMO4P61968 GAPDHP42-201ENST00000406848 981 ntBASIC4.74□□□□□ -1.65
LMO4P61968 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.74□□□□□ -1.65
LMO4P61968 CASKP1-201ENST00000412870 582 ntBASIC4.74□□□□□ -1.65
LMO4P61968 NENFP1-201ENST00000419476 466 ntBASIC4.74□□□□□ -1.65
LMO4P61968 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.74□□□□□ -1.65
LMO4P61968 OR5W1P-201ENST00000423705 938 ntBASIC4.74□□□□□ -1.65
LMO4P61968 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.74□□□□□ -1.65
LMO4P61968 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.74□□□□□ -1.65
LMO4P61968 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.74□□□□□ -1.65
LMO4P61968 HSFY7P-201ENST00000432672 318 ntBASIC4.74□□□□□ -1.65
LMO4P61968 HSFY8P-201ENST00000437934 318 ntBASIC4.74□□□□□ -1.65
LMO4P61968 OR7E116P-201ENST00000448529 957 ntBASIC4.74□□□□□ -1.65
LMO4P61968 AL513343.1-201ENST00000451818 792 ntBASIC4.74□□□□□ -1.65
LMO4P61968 HSFY5P-201ENST00000453726 309 ntBASIC4.74□□□□□ -1.65
LMO4P61968 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.74□□□□□ -1.65
LMO4P61968 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC4.74□□□□□ -1.65
LMO4P61968 AL133445.1-201ENST00000467051 452 ntBASIC4.74□□□□□ -1.65
LMO4P61968 AC006539.1-201ENST00000481419 501 ntBASIC4.74□□□□□ -1.65
LMO4P61968 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.74□□□□□ -1.65
LMO4P61968 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC4.74□□□□□ -1.65
LMO4P61968 BX510359.5-201ENST00000515651 304 ntBASIC4.74□□□□□ -1.65
LMO4P61968 AC027308.1-201ENST00000517993 110 ntBASIC4.74□□□□□ -1.65
LMO4P61968 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.74□□□□□ -1.65
LMO4P61968 MAL2-207ENST00000522828 603 ntTSL 3 BASIC4.74□□□□□ -1.65
LMO4P61968 HNRNPRP2-201ENST00000528421 743 ntBASIC4.74□□□□□ -1.65
LMO4P61968 AC027026.1-201ENST00000532323 742 ntBASIC4.74□□□□□ -1.65
LMO4P61968 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
LMO4P61968 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
LMO4P61968 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.74□□□□□ -1.65
LMO4P61968 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
LMO4P61968 RBM22P12-201ENST00000567098 1255 ntBASIC4.74□□□□□ -1.65
LMO4P61968 AC126365.2-201ENST00000580630 379 ntBASIC4.74□□□□□ -1.65
LMO4P61968 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.74□□□□□ -1.65
LMO4P61968 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.74□□□□□ -1.65
LMO4P61968 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC4.74□□□□□ -1.65
LMO4P61968 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.74□□□□□ -1.65
LMO4P61968 AC011458.1-201ENST00000604034 617 ntBASIC4.74□□□□□ -1.65
LMO4P61968 AC007204.2-201ENST00000615022 616 ntBASIC4.74□□□□□ -1.65
LMO4P61968 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.74□□□□□ -1.65
LMO4P61968 AC241377.1-201ENST00000619797 406 ntBASIC4.74□□□□□ -1.65
LMO4P61968 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
LMO4P61968 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.74□□□□□ -1.65
LMO4P61968 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC4.74□□□□□ -1.65
LMO4P61968 HPVC1-201ENST00000629899 1198 ntBASIC4.74□□□□□ -1.65
LMO4P61968 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC4.74□□□□□ -1.65
LMO4P61968 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LMO4P61968 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
LMO4P61968 AC012078.1-201ENST00000405035 1646 ntBASIC4.74□□□□□ -1.65
LMO4P61968 FGG-205ENST00000407946 1636 ntTSL 5 BASIC4.74□□□□□ -1.65
LMO4P61968 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LMO4P61968 CASC19-248ENST00000641674 1356 ntBASIC4.74□□□□□ -1.65
LMO4P61968 CPS1-IT1-201ENST00000628368 2306 ntBASIC4.74□□□□□ -1.65
LMO4P61968 AL731532.1-201ENST00000623972 4236 ntBASIC4.74□□□□□ -1.65
LMO4P61968 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC4.74□□□□□ -1.65
LMO4P61968 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC4.74□□□□□ -1.65
LMO4P61968 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC4.74□□□□□ -1.65
LMO4P61968 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.74□□□□□ -1.65
LMO4P61968 WBP11P1-201ENST00000562560 1931 ntBASIC4.74□□□□□ -1.65
LMO4P61968 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
LMO4P61968 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
LMO4P61968 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
LMO4P61968 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
LMO4P61968 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
LMO4P61968 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LMO4P61968 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC4.73□□□□□ -1.65
LMO4P61968 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC4.73□□□□□ -1.65
LMO4P61968 DMD-228ENST00000541735 7080 ntTSL 5 BASIC4.73□□□□□ -1.65
LMO4P61968 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
LMO4P61968 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
LMO4P61968 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.73□□□□□ -1.65
LMO4P61968 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
LMO4P61968 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LMO4P61968 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC4.73□□□□□ -1.65
LMO4P61968 AC123769.1-201ENST00000530992 3192 ntBASIC4.73□□□□□ -1.65
LMO4P61968 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LMO4P61968 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC4.73□□□□□ -1.65
LMO4P61968 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LMO4P61968 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LMO4P61968 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.73□□□□□ -1.65
LMO4P61968 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms