Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.8□□□□□ -1.48
CLRN1P58418 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.8□□□□□ -1.48
CLRN1P58418 SPATA20P1-201ENST00000423089 438 ntBASIC5.8□□□□□ -1.48
CLRN1P58418 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC5.8□□□□□ -1.48
CLRN1P58418 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC5.8□□□□□ -1.48
CLRN1P58418 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.8□□□□□ -1.48
CLRN1P58418 UBE2D3P1-201ENST00000436669 444 ntBASIC5.8□□□□□ -1.48
CLRN1P58418 AC083855.1-201ENST00000440041 258 ntBASIC5.8□□□□□ -1.48
CLRN1P58418 AL359265.1-201ENST00000440296 795 ntBASIC5.8□□□□□ -1.48
CLRN1P58418 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC5.8□□□□□ -1.48
CLRN1P58418 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC5.8□□□□□ -1.48
CLRN1P58418 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.8□□□□□ -1.48
CLRN1P58418 EXTL2P1-201ENST00000446218 416 ntBASIC5.8□□□□□ -1.48
CLRN1P58418 CCNJP1-201ENST00000450600 1149 ntBASIC5.8□□□□□ -1.48
CLRN1P58418 AKR1D1P1-201ENST00000457236 936 ntBASIC5.8□□□□□ -1.48
CLRN1P58418 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC5.8□□□□□ -1.48
CLRN1P58418 RPL23AP64-201ENST00000469465 435 ntBASIC5.8□□□□□ -1.48
CLRN1P58418 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC5.8□□□□□ -1.48
CLRN1P58418 RPS3AP49-201ENST00000472161 790 ntBASIC5.8□□□□□ -1.48
CLRN1P58418 RN7SL267P-201ENST00000485107 261 ntBASIC5.8□□□□□ -1.48
CLRN1P58418 RN7SL655P-201ENST00000486087 298 ntBASIC5.8□□□□□ -1.48
CLRN1P58418 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CLRN1P58418 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.8□□□□□ -1.48
CLRN1P58418 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC5.8□□□□□ -1.48
CLRN1P58418 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.8□□□□□ -1.48
CLRN1P58418 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.8□□□□□ -1.48
CLRN1P58418 RFPL4AP3-201ENST00000515267 345 ntBASIC5.8□□□□□ -1.48
CLRN1P58418 MINOS1P4-201ENST00000515470 318 ntBASIC5.8□□□□□ -1.48
CLRN1P58418 RN7SKP34-201ENST00000516142 244 ntBASIC5.8□□□□□ -1.48
CLRN1P58418 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.8□□□□□ -1.48
CLRN1P58418 MTND2P26-201ENST00000528255 1029 ntBASIC5.8□□□□□ -1.48
CLRN1P58418 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC5.8□□□□□ -1.48
CLRN1P58418 OR5AM1P-201ENST00000532136 1032 ntBASIC5.8□□□□□ -1.48
CLRN1P58418 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC5.8□□□□□ -1.48
CLRN1P58418 AP001804.2-201ENST00000533932 910 ntBASIC5.8□□□□□ -1.48
CLRN1P58418 AC006518.2-201ENST00000542513 940 ntBASIC5.8□□□□□ -1.48
CLRN1P58418 AC027667.1-201ENST00000545814 304 ntBASIC5.8□□□□□ -1.48
CLRN1P58418 AC005519.1-201ENST00000554490 601 ntBASIC5.8□□□□□ -1.48
CLRN1P58418 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.8□□□□□ -1.48
CLRN1P58418 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.8□□□□□ -1.48
CLRN1P58418 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.8□□□□□ -1.48
CLRN1P58418 MTND4LP24-201ENST00000572277 291 ntBASIC5.8□□□□□ -1.48
CLRN1P58418 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.8□□□□□ -1.48
CLRN1P58418 AC015688.2-201ENST00000584523 262 ntBASIC5.8□□□□□ -1.48
CLRN1P58418 AC245052.7-201ENST00000601161 359 ntBASIC5.8□□□□□ -1.48
CLRN1P58418 AL020997.3-201ENST00000602843 359 ntBASIC5.8□□□□□ -1.48
CLRN1P58418 AC121247.2-201ENST00000604776 136 ntBASIC5.8□□□□□ -1.48
CLRN1P58418 AC010245.2-201ENST00000606908 1167 ntBASIC5.8□□□□□ -1.48
CLRN1P58418 AC024257.5-201ENST00000612739 531 ntBASIC5.8□□□□□ -1.48
CLRN1P58418 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.8□□□□□ -1.48
CLRN1P58418 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.8□□□□□ -1.48
CLRN1P58418 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CLRN1P58418 AL121890.3-201ENST00000618494 516 ntBASIC5.8□□□□□ -1.48
CLRN1P58418 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLRN1P58418 RPL23AP61-201ENST00000623642 466 ntBASIC5.8□□□□□ -1.48
CLRN1P58418 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.8□□□□□ -1.48
CLRN1P58418 OR8B1P-202ENST00000641132 1178 ntBASIC5.8□□□□□ -1.48
CLRN1P58418 OR8A1-204ENST00000642111 1145 ntBASIC5.8□□□□□ -1.48
CLRN1P58418 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
CLRN1P58418 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CLRN1P58418 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CLRN1P58418 CCDC150P1-201ENST00000537123 2215 ntBASIC5.8□□□□□ -1.48
CLRN1P58418 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLRN1P58418 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
CLRN1P58418 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLRN1P58418 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
CLRN1P58418 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.8□□□□□ -1.48
CLRN1P58418 AC074141.1-201ENST00000588129 2995 ntBASIC5.8□□□□□ -1.48
CLRN1P58418 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLRN1P58418 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
CLRN1P58418 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
CLRN1P58418 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CLRN1P58418 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CLRN1P58418 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC5.8□□□□□ -1.48
CLRN1P58418 AC005034.3-201ENST00000604845 1747 ntBASIC5.79□□□□□ -1.48
CLRN1P58418 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CLRN1P58418 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CLRN1P58418 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLRN1P58418 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CLRN1P58418 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.79□□□□□ -1.48
CLRN1P58418 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLRN1P58418 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLRN1P58418 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
CLRN1P58418 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.79□□□□□ -1.48
CLRN1P58418 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLRN1P58418 U3.52-201ENST00000384034 216 ntBASIC5.79□□□□□ -1.48
CLRN1P58418 RPL5P20-201ENST00000403848 896 ntBASIC5.79□□□□□ -1.48
CLRN1P58418 AL353133.1-201ENST00000407695 401 ntBASIC5.79□□□□□ -1.48
CLRN1P58418 TRGV6-201ENST00000417928 299 ntBASIC5.79□□□□□ -1.48
CLRN1P58418 ELOCP9-201ENST00000418624 239 ntBASIC5.79□□□□□ -1.48
CLRN1P58418 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.79□□□□□ -1.48
CLRN1P58418 GTF2IP2-201ENST00000424290 697 ntBASIC5.79□□□□□ -1.48
CLRN1P58418 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLRN1P58418 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC5.79□□□□□ -1.48
CLRN1P58418 AP003385.1-201ENST00000426387 893 ntBASIC5.79□□□□□ -1.48
CLRN1P58418 AL035458.1-201ENST00000433096 585 ntBASIC5.79□□□□□ -1.48
CLRN1P58418 USP9YP28-201ENST00000435142 589 ntBASIC5.79□□□□□ -1.48
CLRN1P58418 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.79□□□□□ -1.48
CLRN1P58418 Z84478.1-201ENST00000438230 1219 ntBASIC5.79□□□□□ -1.48
CLRN1P58418 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms