Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.26□□□□□ -1.41
VCPP55072 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC6.26□□□□□ -1.41
VCPP55072 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.26□□□□□ -1.41
VCPP55072 RPS15AP30-201ENST00000420976 390 ntBASIC6.26□□□□□ -1.41
VCPP55072 FABP7P2-201ENST00000429946 379 ntBASIC6.26□□□□□ -1.41
VCPP55072 AC073410.1-201ENST00000435125 589 ntBASIC6.26□□□□□ -1.41
VCPP55072 AC016027.4-201ENST00000450866 277 ntBASIC6.26□□□□□ -1.41
VCPP55072 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC6.26□□□□□ -1.41
VCPP55072 AC005532.2-201ENST00000467154 373 ntBASIC6.26□□□□□ -1.41
VCPP55072 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.26□□□□□ -1.41
VCPP55072 CCDC11P1-201ENST00000503137 1162 ntBASIC6.26□□□□□ -1.41
VCPP55072 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.26□□□□□ -1.41
VCPP55072 AC138866.2-201ENST00000508650 584 ntBASIC6.26□□□□□ -1.41
VCPP55072 AC109481.1-201ENST00000509173 282 ntBASIC6.26□□□□□ -1.41
VCPP55072 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.26□□□□□ -1.41
VCPP55072 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.26□□□□□ -1.41
VCPP55072 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.26□□□□□ -1.41
VCPP55072 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC6.26□□□□□ -1.41
VCPP55072 AC015802.2-201ENST00000589690 189 ntBASIC6.26□□□□□ -1.41
VCPP55072 AC119403.2-201ENST00000590960 598 ntBASIC6.26□□□□□ -1.41
VCPP55072 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.26□□□□□ -1.41
VCPP55072 AL445222.1-201ENST00000607259 628 ntBASIC6.26□□□□□ -1.41
VCPP55072 AL021918.2-201ENST00000613415 194 ntBASIC6.26□□□□□ -1.41
VCPP55072 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
VCPP55072 AL357562.1-201ENST00000624911 609 ntBASIC6.26□□□□□ -1.41
VCPP55072 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
VCPP55072 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.26□□□□□ -1.41
VCPP55072 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
VCPP55072 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
VCPP55072 MSL3P1-202ENST00000440028 1468 ntBASIC6.26□□□□□ -1.41
VCPP55072 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
VCPP55072 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
VCPP55072 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
VCPP55072 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.25□□□□□ -1.41
VCPP55072 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
VCPP55072 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.25□□□□□ -1.41
VCPP55072 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
VCPP55072 PABPC1P6-201ENST00000445594 1829 ntBASIC6.25□□□□□ -1.41
VCPP55072 AC027088.4-201ENST00000611559 1947 ntBASIC6.25□□□□□ -1.41
VCPP55072 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.25□□□□□ -1.41
VCPP55072 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
VCPP55072 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
VCPP55072 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
VCPP55072 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
VCPP55072 RNA5SP46-201ENST00000362370 120 ntBASIC6.25□□□□□ -1.41
VCPP55072 RNU105B-201ENST00000364478 208 ntBASIC6.25□□□□□ -1.41
VCPP55072 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.25□□□□□ -1.41
VCPP55072 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC6.25□□□□□ -1.41
VCPP55072 RN7SKP125-201ENST00000410481 302 ntBASIC6.25□□□□□ -1.41
VCPP55072 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.25□□□□□ -1.41
VCPP55072 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.25□□□□□ -1.41
VCPP55072 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC6.25□□□□□ -1.41
VCPP55072 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.25□□□□□ -1.41
VCPP55072 CUBNP2-201ENST00000443534 1139 ntBASIC6.25□□□□□ -1.41
VCPP55072 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
VCPP55072 AL445466.1-201ENST00000448432 357 ntBASIC6.25□□□□□ -1.41
VCPP55072 RPL35AP28-201ENST00000459730 331 ntBASIC6.25□□□□□ -1.41
VCPP55072 AC092865.4-201ENST00000477936 615 ntBASIC6.25□□□□□ -1.41
VCPP55072 RN7SL808P-201ENST00000496066 299 ntBASIC6.25□□□□□ -1.41
VCPP55072 GOLGA5P1-201ENST00000507317 980 ntBASIC6.25□□□□□ -1.41
VCPP55072 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC6.25□□□□□ -1.41
VCPP55072 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.25□□□□□ -1.41
VCPP55072 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC6.25□□□□□ -1.41
VCPP55072 MIR6820-201ENST00000611508 62 ntBASIC6.25□□□□□ -1.41
VCPP55072 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.25□□□□□ -1.41
VCPP55072 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
VCPP55072 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.25□□□□□ -1.41
VCPP55072 GTF2IP4-201ENST00000453092 2054 ntBASIC6.25□□□□□ -1.41
VCPP55072 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
VCPP55072 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
VCPP55072 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
VCPP55072 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
VCPP55072 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
VCPP55072 AC087516.1-201ENST00000561236 2428 ntBASIC6.25□□□□□ -1.41
VCPP55072 AC005224.3-201ENST00000584683 2140 ntBASIC6.25□□□□□ -1.41
VCPP55072 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.25□□□□□ -1.41
VCPP55072 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
VCPP55072 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.24□□□□□ -1.41
VCPP55072 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.24□□□□□ -1.41
VCPP55072 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
VCPP55072 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
VCPP55072 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
VCPP55072 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
VCPP55072 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.24□□□□□ -1.41
VCPP55072 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
VCPP55072 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
VCPP55072 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
VCPP55072 OR10R3P-201ENST00000361688 942 ntBASIC6.24□□□□□ -1.41
VCPP55072 MIR1286-201ENST00000408112 78 ntBASIC6.24□□□□□ -1.41
VCPP55072 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.24□□□□□ -1.41
VCPP55072 AL590762.4-201ENST00000425885 253 ntBASIC6.24□□□□□ -1.41
VCPP55072 AL590399.2-201ENST00000427536 309 ntBASIC6.24□□□□□ -1.41
VCPP55072 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC6.24□□□□□ -1.41
VCPP55072 CYCSP51-201ENST00000443545 318 ntBASIC6.24□□□□□ -1.41
VCPP55072 AL450996.1-201ENST00000445574 1202 ntBASIC6.24□□□□□ -1.41
VCPP55072 AC007386.1-201ENST00000455212 582 ntBASIC6.24□□□□□ -1.41
VCPP55072 ACA64.4-201ENST00000459070 127 ntBASIC6.24□□□□□ -1.41
VCPP55072 RN7SL269P-201ENST00000467795 305 ntBASIC6.24□□□□□ -1.41
VCPP55072 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.24□□□□□ -1.41
VCPP55072 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms