Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC7.08□□□□□ -1.28
PMS1P54277 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PMS1P54277 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PMS1P54277 ZNF849P-201ENST00000594711 1566 ntBASIC7.08□□□□□ -1.28
PMS1P54277 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC7.08□□□□□ -1.28
PMS1P54277 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PMS1P54277 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC7.07□□□□□ -1.28
PMS1P54277 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PMS1P54277 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PMS1P54277 FGG-201ENST00000336098 1659 ntTSL 2 BASIC7.07□□□□□ -1.28
PMS1P54277 HSPD1P7-201ENST00000447985 1686 ntBASIC7.07□□□□□ -1.28
PMS1P54277 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PMS1P54277 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PMS1P54277 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PMS1P54277 AC010894.1-201ENST00000313760 361 ntBASIC7.07□□□□□ -1.28
PMS1P54277 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PMS1P54277 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PMS1P54277 ANKRD36P1-201ENST00000344424 659 ntBASIC7.07□□□□□ -1.28
PMS1P54277 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC7.07□□□□□ -1.28
PMS1P54277 OR13C3-201ENST00000374781 1108 ntBASIC7.07□□□□□ -1.28
PMS1P54277 RNU6-31P-201ENST00000384388 108 ntBASIC7.07□□□□□ -1.28
PMS1P54277 Y_RNA.505-201ENST00000384489 102 ntBASIC7.07□□□□□ -1.28
PMS1P54277 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PMS1P54277 AP003170.5-201ENST00000397185 335 ntBASIC7.07□□□□□ -1.28
PMS1P54277 AL391419.1-201ENST00000398901 1275 ntBASIC7.07□□□□□ -1.28
PMS1P54277 AL138880.1-201ENST00000405824 642 ntBASIC7.07□□□□□ -1.28
PMS1P54277 RN7SKP281-201ENST00000410472 352 ntBASIC7.07□□□□□ -1.28
PMS1P54277 AC092638.1-201ENST00000411966 1275 ntBASIC7.07□□□□□ -1.28
PMS1P54277 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC7.07□□□□□ -1.28
PMS1P54277 QRSL1P2-201ENST00000418582 964 ntBASIC7.07□□□□□ -1.28
PMS1P54277 NENFP1-201ENST00000419476 466 ntBASIC7.07□□□□□ -1.28
PMS1P54277 CYP4F30P-202ENST00000420048 405 ntBASIC7.07□□□□□ -1.28
PMS1P54277 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PMS1P54277 MUPP-201ENST00000438111 566 ntBASIC7.07□□□□□ -1.28
PMS1P54277 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC7.07□□□□□ -1.28
PMS1P54277 AL353898.1-201ENST00000444055 238 ntBASIC7.07□□□□□ -1.28
PMS1P54277 HMGB3P6-201ENST00000444896 598 ntBASIC7.07□□□□□ -1.28
PMS1P54277 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC7.07□□□□□ -1.28
PMS1P54277 SEPT14P24-201ENST00000447236 180 ntBASIC7.07□□□□□ -1.28
PMS1P54277 MYO5BP2-201ENST00000449815 1277 ntBASIC7.07□□□□□ -1.28
PMS1P54277 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC7.07□□□□□ -1.28
PMS1P54277 SNX18P26-201ENST00000458433 740 ntBASIC7.07□□□□□ -1.28
PMS1P54277 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC7.07□□□□□ -1.28
PMS1P54277 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC7.07□□□□□ -1.28
PMS1P54277 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC7.07□□□□□ -1.28
PMS1P54277 AC122714.1-201ENST00000502510 459 ntBASIC7.07□□□□□ -1.28
PMS1P54277 RPF2P2-201ENST00000504693 896 ntBASIC7.07□□□□□ -1.28
PMS1P54277 AC131392.1-201ENST00000506490 633 ntBASIC7.07□□□□□ -1.28
PMS1P54277 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC7.07□□□□□ -1.28
PMS1P54277 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC7.07□□□□□ -1.28
PMS1P54277 AC093664.1-201ENST00000511779 289 ntBASIC7.07□□□□□ -1.28
PMS1P54277 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC7.07□□□□□ -1.28
PMS1P54277 RNU6-1334P-201ENST00000516032 105 ntBASIC7.07□□□□□ -1.28
PMS1P54277 RNA5SP303-201ENST00000516192 130 ntBASIC7.07□□□□□ -1.28
PMS1P54277 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC7.07□□□□□ -1.28
PMS1P54277 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC7.07□□□□□ -1.28
PMS1P54277 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
PMS1P54277 DPPA3P2-201ENST00000553589 478 ntBASIC7.07□□□□□ -1.28
PMS1P54277 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC7.07□□□□□ -1.28
PMS1P54277 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC7.07□□□□□ -1.28
PMS1P54277 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC7.07□□□□□ -1.28
PMS1P54277 MIR3159-201ENST00000584572 74 ntBASIC7.07□□□□□ -1.28
PMS1P54277 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC7.07□□□□□ -1.28
PMS1P54277 AP002906.1-201ENST00000603405 233 ntBASIC7.07□□□□□ -1.28
PMS1P54277 AC018638.7-201ENST00000605836 1114 ntBASIC7.07□□□□□ -1.28
PMS1P54277 AC007204.1-201ENST00000621794 555 ntBASIC7.07□□□□□ -1.28
PMS1P54277 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC7.07□□□□□ -1.28
PMS1P54277 MIR1322-201ENST00000638013 71 ntBASIC7.07□□□□□ -1.28
PMS1P54277 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
PMS1P54277 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
PMS1P54277 YES1P1-201ENST00000418510 1628 ntBASIC7.07□□□□□ -1.28
PMS1P54277 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
PMS1P54277 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PMS1P54277 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
PMS1P54277 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PMS1P54277 AC005702.3-201ENST00000585345 1447 ntBASIC7.07□□□□□ -1.28
PMS1P54277 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PMS1P54277 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
PMS1P54277 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC7.07□□□□□ -1.28
PMS1P54277 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PMS1P54277 AC011369.2-201ENST00000624423 1567 ntBASIC7.07□□□□□ -1.28
PMS1P54277 POT1-202ENST00000393329 3950 ntTSL 5 BASIC7.07□□□□□ -1.28
PMS1P54277 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PMS1P54277 MTND4P4-201ENST00000439033 1366 ntBASIC7.07□□□□□ -1.28
PMS1P54277 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC7.07□□□□□ -1.28
PMS1P54277 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
PMS1P54277 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC7.07□□□□□ -1.28
PMS1P54277 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC7.07□□□□□ -1.28
PMS1P54277 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC7.06□□□□□ -1.28
PMS1P54277 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PMS1P54277 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC7.06□□□□□ -1.28
PMS1P54277 Z83820.1-201ENST00000456978 1499 ntBASIC7.06□□□□□ -1.28
PMS1P54277 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
PMS1P54277 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC7.06□□□□□ -1.28
PMS1P54277 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PMS1P54277 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
PMS1P54277 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PMS1P54277 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
PMS1P54277 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC7.06□□□□□ -1.28
PMS1P54277 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms