Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC7.14□□□□□ -1.27
MRE11P49959 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
MRE11P49959 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
MRE11P49959 RN7SKP189-201ENST00000365042 330 ntBASIC7.14□□□□□ -1.27
MRE11P49959 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
MRE11P49959 RGS5-202ENST00000367903 934 ntTSL 3 BASIC7.14□□□□□ -1.27
MRE11P49959 AC004386.1-201ENST00000393214 761 ntBASIC7.14□□□□□ -1.27
MRE11P49959 MIR1178-201ENST00000408396 91 ntBASIC7.14□□□□□ -1.27
MRE11P49959 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC7.14□□□□□ -1.27
MRE11P49959 VPS26BP1-201ENST00000417155 755 ntBASIC7.14□□□□□ -1.27
MRE11P49959 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
MRE11P49959 SEPT7P7-201ENST00000420492 1301 ntBASIC7.14□□□□□ -1.27
MRE11P49959 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC7.14□□□□□ -1.27
MRE11P49959 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC7.14□□□□□ -1.27
MRE11P49959 GTF3AP6-201ENST00000432585 986 ntBASIC7.14□□□□□ -1.27
MRE11P49959 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC7.14□□□□□ -1.27
MRE11P49959 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
MRE11P49959 AL121578.2-201ENST00000448797 447 ntBASIC7.14□□□□□ -1.27
MRE11P49959 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC7.14□□□□□ -1.27
MRE11P49959 MTCYBP14-201ENST00000457471 715 ntBASIC7.14□□□□□ -1.27
MRE11P49959 SCG5-207ENST00000497208 949 ntTSL 5 BASIC7.14□□□□□ -1.27
MRE11P49959 AC091849.1-201ENST00000509920 121 ntBASIC7.14□□□□□ -1.27
MRE11P49959 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC7.14□□□□□ -1.27
MRE11P49959 TOMM22P4-201ENST00000511318 336 ntBASIC7.14□□□□□ -1.27
MRE11P49959 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC7.14□□□□□ -1.27
MRE11P49959 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
MRE11P49959 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC7.14□□□□□ -1.27
MRE11P49959 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC7.14□□□□□ -1.27
MRE11P49959 BMPR1APS2-201ENST00000527904 1012 ntBASIC7.14□□□□□ -1.27
MRE11P49959 AC113192.3-201ENST00000529152 742 ntBASIC7.14□□□□□ -1.27
MRE11P49959 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC7.14□□□□□ -1.27
MRE11P49959 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC7.14□□□□□ -1.27
MRE11P49959 RPL41P2-201ENST00000544920 409 ntBASIC7.14□□□□□ -1.27
MRE11P49959 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC7.14□□□□□ -1.27
MRE11P49959 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
MRE11P49959 AC135626.1-201ENST00000556983 435 ntBASIC7.14□□□□□ -1.27
MRE11P49959 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC7.14□□□□□ -1.27
MRE11P49959 NPIPB1P-202ENST00000588786 828 ntBASIC7.14□□□□□ -1.27
MRE11P49959 AC060780.2-201ENST00000589047 198 ntBASIC7.14□□□□□ -1.27
MRE11P49959 VN1R87P-201ENST00000596706 487 ntBASIC7.14□□□□□ -1.27
MRE11P49959 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
MRE11P49959 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC7.14□□□□□ -1.27
MRE11P49959 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC7.14□□□□□ -1.27
MRE11P49959 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC7.14□□□□□ -1.27
MRE11P49959 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
MRE11P49959 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
MRE11P49959 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
MRE11P49959 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
MRE11P49959 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
MRE11P49959 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
MRE11P49959 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
MRE11P49959 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
MRE11P49959 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
MRE11P49959 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC7.13□□□□□ -1.27
MRE11P49959 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
MRE11P49959 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC7.13□□□□□ -1.27
MRE11P49959 AL136984.1-201ENST00000607611 1893 ntBASIC7.13□□□□□ -1.27
MRE11P49959 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
MRE11P49959 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
MRE11P49959 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
MRE11P49959 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
MRE11P49959 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC7.13□□□□□ -1.27
MRE11P49959 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
MRE11P49959 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
MRE11P49959 AC087752.1-201ENST00000391360 558 ntBASIC7.13□□□□□ -1.27
MRE11P49959 UBBP1-201ENST00000392399 473 ntBASIC7.13□□□□□ -1.27
MRE11P49959 FDPSP5-201ENST00000399474 1057 ntBASIC7.13□□□□□ -1.27
MRE11P49959 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC7.13□□□□□ -1.27
MRE11P49959 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC7.13□□□□□ -1.27
MRE11P49959 CDY17P-201ENST00000414121 1282 ntBASIC7.13□□□□□ -1.27
MRE11P49959 AL512504.1-201ENST00000415494 778 ntBASIC7.13□□□□□ -1.27
MRE11P49959 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC7.13□□□□□ -1.27
MRE11P49959 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
MRE11P49959 MTND4LP14-201ENST00000429447 288 ntBASIC7.13□□□□□ -1.27
MRE11P49959 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC7.13□□□□□ -1.27
MRE11P49959 PFN1P11-201ENST00000445829 389 ntBASIC7.13□□□□□ -1.27
MRE11P49959 AC073850.1-201ENST00000449243 255 ntBASIC7.13□□□□□ -1.27
MRE11P49959 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC7.13□□□□□ -1.27
MRE11P49959 RPL26P30-201ENST00000453533 435 ntBASIC7.13□□□□□ -1.27
MRE11P49959 AC108729.2-201ENST00000476543 840 ntBASIC7.13□□□□□ -1.27
MRE11P49959 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC7.13□□□□□ -1.27
MRE11P49959 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC7.13□□□□□ -1.27
MRE11P49959 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC7.13□□□□□ -1.27
MRE11P49959 MTCYBP44-201ENST00000514835 823 ntBASIC7.13□□□□□ -1.27
MRE11P49959 MTND2P32-201ENST00000521584 1038 ntBASIC7.13□□□□□ -1.27
MRE11P49959 IGLVIV-66-1-201ENST00000521832 460 ntBASIC7.13□□□□□ -1.27
MRE11P49959 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC7.13□□□□□ -1.27
MRE11P49959 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
MRE11P49959 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC7.13□□□□□ -1.27
MRE11P49959 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC7.13□□□□□ -1.27
MRE11P49959 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC7.13□□□□□ -1.27
MRE11P49959 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC7.13□□□□□ -1.27
MRE11P49959 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC7.13□□□□□ -1.27
MRE11P49959 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC7.13□□□□□ -1.27
MRE11P49959 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC7.13□□□□□ -1.27
MRE11P49959 AC025811.1-201ENST00000604312 472 ntBASIC7.13□□□□□ -1.27
MRE11P49959 AC114878.2-201ENST00000604863 1251 ntBASIC7.13□□□□□ -1.27
MRE11P49959 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC7.13□□□□□ -1.27
MRE11P49959 REV3L-214ENST00000619481 969 ntTSL 5 BASIC7.13□□□□□ -1.27
MRE11P49959 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms