Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AL662874.1-201ENST00000426065 230 ntBASIC6.49□□□□□ -1.37
CIITAP33076 AC092651.1-201ENST00000426110 312 ntBASIC6.49□□□□□ -1.37
CIITAP33076 TRGV7-201ENST00000427089 353 ntBASIC6.49□□□□□ -1.37
CIITAP33076 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.49□□□□□ -1.37
CIITAP33076 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC6.49□□□□□ -1.37
CIITAP33076 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.49□□□□□ -1.37
CIITAP33076 AP000281.1-201ENST00000444036 316 ntBASIC6.49□□□□□ -1.37
CIITAP33076 AC005297.1-201ENST00000444765 862 ntBASIC6.49□□□□□ -1.37
CIITAP33076 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CIITAP33076 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC6.49□□□□□ -1.37
CIITAP33076 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.49□□□□□ -1.37
CIITAP33076 SNORA81.2-201ENST00000516868 170 ntBASIC6.49□□□□□ -1.37
CIITAP33076 SNORA43.3-201ENST00000517240 103 ntBASIC6.49□□□□□ -1.37
CIITAP33076 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.49□□□□□ -1.37
CIITAP33076 AC025857.1-201ENST00000525252 377 ntBASIC6.49□□□□□ -1.37
CIITAP33076 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.49□□□□□ -1.37
CIITAP33076 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.49□□□□□ -1.37
CIITAP33076 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.49□□□□□ -1.37
CIITAP33076 IGBP1P1-201ENST00000554337 1009 ntBASIC6.49□□□□□ -1.37
CIITAP33076 HSPE1P2-201ENST00000554777 306 ntBASIC6.49□□□□□ -1.37
CIITAP33076 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC6.49□□□□□ -1.37
CIITAP33076 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.49□□□□□ -1.37
CIITAP33076 NPM1P42-201ENST00000560329 862 ntBASIC6.49□□□□□ -1.37
CIITAP33076 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC6.49□□□□□ -1.37
CIITAP33076 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.49□□□□□ -1.37
CIITAP33076 AC023389.2-201ENST00000580031 955 ntBASIC6.49□□□□□ -1.37
CIITAP33076 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC6.49□□□□□ -1.37
CIITAP33076 AC009237.12-201ENST00000604755 742 ntBASIC6.49□□□□□ -1.37
CIITAP33076 AC144521.1-201ENST00000607148 956 ntBASIC6.49□□□□□ -1.37
CIITAP33076 AL133481.2-203ENST00000607558 139 ntBASIC6.49□□□□□ -1.37
CIITAP33076 AC096586.2-201ENST00000610260 441 ntBASIC6.49□□□□□ -1.37
CIITAP33076 AC126175.1-201ENST00000617041 758 ntBASIC6.49□□□□□ -1.37
CIITAP33076 AC021422.1-201ENST00000621212 473 ntBASIC6.49□□□□□ -1.37
CIITAP33076 AC009120.7-201ENST00000623452 780 ntBASIC6.49□□□□□ -1.37
CIITAP33076 AC104820.1-201ENST00000624183 307 ntBASIC6.49□□□□□ -1.37
CIITAP33076 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.49□□□□□ -1.37
CIITAP33076 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.49□□□□□ -1.37
CIITAP33076 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
CIITAP33076 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.49□□□□□ -1.37
CIITAP33076 LINC01963-201ENST00000562038 3148 ntBASIC6.49□□□□□ -1.37
CIITAP33076 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CIITAP33076 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CIITAP33076 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
CIITAP33076 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CIITAP33076 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CIITAP33076 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CIITAP33076 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CIITAP33076 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.48□□□□□ -1.37
CIITAP33076 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CIITAP33076 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CIITAP33076 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.48□□□□□ -1.37
CIITAP33076 AL034546.1-201ENST00000623740 3693 ntBASIC6.48□□□□□ -1.37
CIITAP33076 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CIITAP33076 RNA5SP131-201ENST00000365452 119 ntBASIC6.48□□□□□ -1.37
CIITAP33076 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CIITAP33076 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.48□□□□□ -1.37
CIITAP33076 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CIITAP33076 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.48□□□□□ -1.37
CIITAP33076 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CIITAP33076 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.48□□□□□ -1.37
CIITAP33076 RPL12P16-201ENST00000431098 498 ntBASIC6.48□□□□□ -1.37
CIITAP33076 AC002504.1-201ENST00000438281 691 ntBASIC6.48□□□□□ -1.37
CIITAP33076 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.48□□□□□ -1.37
CIITAP33076 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.48□□□□□ -1.37
CIITAP33076 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CIITAP33076 PDCL3P4-201ENST00000489621 720 ntBASIC6.48□□□□□ -1.37
CIITAP33076 OR7E157P-201ENST00000494376 911 ntBASIC6.48□□□□□ -1.37
CIITAP33076 AC138866.2-201ENST00000508650 584 ntBASIC6.48□□□□□ -1.37
CIITAP33076 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
CIITAP33076 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.48□□□□□ -1.37
CIITAP33076 AP003080.1-202ENST00000526526 915 ntBASIC6.48□□□□□ -1.37
CIITAP33076 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CIITAP33076 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.48□□□□□ -1.37
CIITAP33076 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC6.48□□□□□ -1.37
CIITAP33076 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC6.48□□□□□ -1.37
CIITAP33076 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.48□□□□□ -1.37
CIITAP33076 AL513327.3-201ENST00000602618 469 ntBASIC6.48□□□□□ -1.37
CIITAP33076 RPL21P136-201ENST00000605378 396 ntBASIC6.48□□□□□ -1.37
CIITAP33076 AC005972.3-201ENST00000606304 481 ntBASIC6.48□□□□□ -1.37
CIITAP33076 AP000240.1-201ENST00000609910 452 ntBASIC6.48□□□□□ -1.37
CIITAP33076 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.48□□□□□ -1.37
CIITAP33076 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
CIITAP33076 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.48□□□□□ -1.37
CIITAP33076 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.48□□□□□ -1.37
CIITAP33076 AC027279.4-201ENST00000624371 2072 ntBASIC6.48□□□□□ -1.37
CIITAP33076 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
CIITAP33076 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.48□□□□□ -1.37
CIITAP33076 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CIITAP33076 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CIITAP33076 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CIITAP33076 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.48□□□□□ -1.37
CIITAP33076 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CIITAP33076 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
CIITAP33076 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CIITAP33076 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.47□□□□□ -1.37
CIITAP33076 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.47□□□□□ -1.37
CIITAP33076 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC6.47□□□□□ -1.37
CIITAP33076 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.47□□□□□ -1.37
CIITAP33076 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
CIITAP33076 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms