Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 MTND4LP17-201ENST00000414607 293 ntBASIC8.79□□□□□ -1
CLIP1P30622 OR10T1P-201ENST00000424327 947 ntBASIC8.79□□□□□ -1
CLIP1P30622 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC8.79□□□□□ -1
CLIP1P30622 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC8.79□□□□□ -1
CLIP1P30622 AC245047.2-201ENST00000441060 530 ntBASIC8.79□□□□□ -1
CLIP1P30622 AC079841.1-201ENST00000481228 950 ntBASIC8.79□□□□□ -1
CLIP1P30622 RPS23P1-201ENST00000491662 432 ntBASIC8.79□□□□□ -1
CLIP1P30622 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC8.79□□□□□ -1
CLIP1P30622 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC8.79□□□□□ -1
CLIP1P30622 AC122688.1-201ENST00000541494 223 ntBASIC8.79□□□□□ -1
CLIP1P30622 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC8.79□□□□□ -1
CLIP1P30622 AC009237.13-201ENST00000603193 276 ntBASIC8.79□□□□□ -1
CLIP1P30622 SAMMSON-209ENST00000641222 1100 ntBASIC8.79□□□□□ -1
CLIP1P30622 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC8.79□□□□□ -1
CLIP1P30622 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC8.79□□□□□ -1
CLIP1P30622 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
CLIP1P30622 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
CLIP1P30622 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
CLIP1P30622 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC8.78□□□□□ -1
CLIP1P30622 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC8.78□□□□□ -1
CLIP1P30622 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC8.78□□□□□ -1
CLIP1P30622 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC8.78□□□□□ -1
CLIP1P30622 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC8.78□□□□□ -1
CLIP1P30622 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
CLIP1P30622 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC8.78□□□□□ -1
CLIP1P30622 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
CLIP1P30622 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
CLIP1P30622 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC8.78□□□□□ -1
CLIP1P30622 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
CLIP1P30622 OR4F13P-202ENST00000560066 2054 ntBASIC8.78□□□□□ -1
CLIP1P30622 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC8.78□□□□□ -1
CLIP1P30622 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC8.78□□□□□ -1
CLIP1P30622 UGT2B24P-201ENST00000514441 1597 ntBASIC8.78□□□□□ -1
CLIP1P30622 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
CLIP1P30622 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC8.78□□□□□ -1
CLIP1P30622 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC8.78□□□□□ -1
CLIP1P30622 AC105399.1-202ENST00000447303 205 ntBASIC8.78□□□□□ -1
CLIP1P30622 AZGP1P2-201ENST00000454506 345 ntBASIC8.78□□□□□ -1
CLIP1P30622 RPL7P45-201ENST00000455851 743 ntBASIC8.78□□□□□ -1
CLIP1P30622 RPS21P4-201ENST00000487122 248 ntBASIC8.78□□□□□ -1
CLIP1P30622 AC021106.1-201ENST00000509020 1058 ntBASIC8.78□□□□□ -1
CLIP1P30622 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC8.78□□□□□ -1
CLIP1P30622 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC8.78□□□□□ -1
CLIP1P30622 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC8.78□□□□□ -1
CLIP1P30622 AP000769.2-201ENST00000602344 396 ntBASIC8.78□□□□□ -1
CLIP1P30622 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC8.78□□□□□ -1
CLIP1P30622 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
CLIP1P30622 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC8.77□□□□□ -1
CLIP1P30622 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC8.77□□□□□ -1
CLIP1P30622 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CLIP1P30622 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
CLIP1P30622 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
CLIP1P30622 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CLIP1P30622 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
CLIP1P30622 RPL7L1P9-201ENST00000431298 745 ntBASIC8.77□□□□□ -1.01
CLIP1P30622 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC8.77□□□□□ -1.01
CLIP1P30622 SNORD125-201ENST00000459538 96 ntBASIC8.77□□□□□ -1.01
CLIP1P30622 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
CLIP1P30622 OR4A6P-201ENST00000534364 970 ntBASIC8.77□□□□□ -1.01
CLIP1P30622 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC8.77□□□□□ -1.01
CLIP1P30622 AC239803.2-201ENST00000610161 430 ntBASIC8.77□□□□□ -1.01
CLIP1P30622 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC8.77□□□□□ -1.01
CLIP1P30622 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CLIP1P30622 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
CLIP1P30622 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CLIP1P30622 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CLIP1P30622 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC8.77□□□□□ -1.01
CLIP1P30622 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
CLIP1P30622 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CLIP1P30622 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
CLIP1P30622 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
CLIP1P30622 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC8.76□□□□□ -1.01
CLIP1P30622 AC232271.1-201ENST00000602455 2715 ntBASIC8.76□□□□□ -1.01
CLIP1P30622 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
CLIP1P30622 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
CLIP1P30622 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
CLIP1P30622 U8.4-201ENST00000363626 134 ntBASIC8.76□□□□□ -1.01
CLIP1P30622 CYP2AC1P-201ENST00000407830 1173 ntBASIC8.76□□□□□ -1.01
CLIP1P30622 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC8.76□□□□□ -1.01
CLIP1P30622 AC108075.1-201ENST00000424692 529 ntBASIC8.76□□□□□ -1.01
CLIP1P30622 AL590399.2-201ENST00000427536 309 ntBASIC8.76□□□□□ -1.01
CLIP1P30622 DSTNP5-201ENST00000427921 523 ntBASIC8.76□□□□□ -1.01
CLIP1P30622 OR52B5P-201ENST00000435337 951 ntBASIC8.76□□□□□ -1.01
CLIP1P30622 RPS23P9-201ENST00000448848 438 ntBASIC8.76□□□□□ -1.01
CLIP1P30622 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC8.76□□□□□ -1.01
CLIP1P30622 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC8.76□□□□□ -1.01
CLIP1P30622 PGAM1P13-201ENST00000507497 754 ntBASIC8.76□□□□□ -1.01
CLIP1P30622 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC8.76□□□□□ -1.01
CLIP1P30622 GAPDHP62-201ENST00000515313 990 ntBASIC8.76□□□□□ -1.01
CLIP1P30622 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC8.76□□□□□ -1.01
CLIP1P30622 AL445222.1-201ENST00000607259 628 ntBASIC8.76□□□□□ -1.01
CLIP1P30622 AC116651.1-201ENST00000609724 556 ntBASIC8.76□□□□□ -1.01
CLIP1P30622 AC109583.2-201ENST00000617367 129 ntBASIC8.76□□□□□ -1.01
CLIP1P30622 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC8.76□□□□□ -1.01
CLIP1P30622 OR52B5P-202ENST00000641118 1110 ntBASIC8.76□□□□□ -1.01
CLIP1P30622 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC8.76□□□□□ -1.01
CLIP1P30622 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
CLIP1P30622 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
CLIP1P30622 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
CLIP1P30622 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms