Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
TOP1P11387 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
TOP1P11387 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
TOP1P11387 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.67□□□□□ -1.34
TOP1P11387 AL137141.1-201ENST00000624622 4836 ntBASIC6.66□□□□□ -1.34
TOP1P11387 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
TOP1P11387 AL121839.2-201ENST00000565058 6943 ntBASIC6.66□□□□□ -1.34
TOP1P11387 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.66□□□□□ -1.34
TOP1P11387 Z95114.1-201ENST00000624264 14574 ntBASIC6.66□□□□□ -1.34
TOP1P11387 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
TOP1P11387 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
TOP1P11387 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
TOP1P11387 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
TOP1P11387 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.66□□□□□ -1.34
TOP1P11387 RNA5SP91-201ENST00000390902 119 ntBASIC6.66□□□□□ -1.34
TOP1P11387 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.66□□□□□ -1.34
TOP1P11387 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.66□□□□□ -1.34
TOP1P11387 AL450996.1-201ENST00000445574 1202 ntBASIC6.66□□□□□ -1.34
TOP1P11387 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.66□□□□□ -1.34
TOP1P11387 AC093815.1-201ENST00000508637 280 ntBASIC6.66□□□□□ -1.34
TOP1P11387 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
TOP1P11387 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.66□□□□□ -1.34
TOP1P11387 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.66□□□□□ -1.34
TOP1P11387 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.66□□□□□ -1.34
TOP1P11387 NANOGP3-201ENST00000605855 286 ntBASIC6.66□□□□□ -1.34
TOP1P11387 AL133481.2-203ENST00000607558 139 ntBASIC6.66□□□□□ -1.34
TOP1P11387 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
TOP1P11387 AL353684.1-201ENST00000622677 1120 ntBASIC6.66□□□□□ -1.34
TOP1P11387 AL691477.1-201ENST00000624398 162 ntBASIC6.66□□□□□ -1.34
TOP1P11387 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
TOP1P11387 AC114786.1-201ENST00000512892 1415 ntBASIC6.66□□□□□ -1.34
TOP1P11387 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.66□□□□□ -1.34
TOP1P11387 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
TOP1P11387 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
TOP1P11387 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
TOP1P11387 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
TOP1P11387 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
TOP1P11387 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
TOP1P11387 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.65□□□□□ -1.34
TOP1P11387 AC004076.2-201ENST00000620532 3323 ntBASIC6.65□□□□□ -1.34
TOP1P11387 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
TOP1P11387 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
TOP1P11387 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
TOP1P11387 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
TOP1P11387 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.65□□□□□ -1.34
TOP1P11387 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
TOP1P11387 U3.10-201ENST00000364459 214 ntBASIC6.65□□□□□ -1.34
TOP1P11387 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.65□□□□□ -1.34
TOP1P11387 OR6E1P-201ENST00000414424 923 ntBASIC6.65□□□□□ -1.34
TOP1P11387 AL513325.1-201ENST00000417716 1034 ntBASIC6.65□□□□□ -1.34
TOP1P11387 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.65□□□□□ -1.34
TOP1P11387 FMO7P-201ENST00000436045 768 ntBASIC6.65□□□□□ -1.34
TOP1P11387 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
TOP1P11387 AL136038.1-201ENST00000497246 351 ntBASIC6.65□□□□□ -1.34
TOP1P11387 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.65□□□□□ -1.34
TOP1P11387 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.65□□□□□ -1.34
TOP1P11387 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
TOP1P11387 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.65□□□□□ -1.34
TOP1P11387 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.65□□□□□ -1.34
TOP1P11387 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
TOP1P11387 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.65□□□□□ -1.35
TOP1P11387 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.65□□□□□ -1.35
TOP1P11387 AL592429.1-201ENST00000403909 1473 ntBASIC6.65□□□□□ -1.35
TOP1P11387 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
TOP1P11387 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
TOP1P11387 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
TOP1P11387 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.64□□□□□ -1.35
TOP1P11387 AC027279.4-201ENST00000624371 2072 ntBASIC6.64□□□□□ -1.35
TOP1P11387 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TOP1P11387 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.64□□□□□ -1.35
TOP1P11387 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
TOP1P11387 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.64□□□□□ -1.35
TOP1P11387 MIR143-201ENST00000385300 106 ntBASIC6.64□□□□□ -1.35
TOP1P11387 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.64□□□□□ -1.35
TOP1P11387 TNPO1P1-201ENST00000423641 1138 ntBASIC6.64□□□□□ -1.35
TOP1P11387 AL121776.1-201ENST00000429337 372 ntBASIC6.64□□□□□ -1.35
TOP1P11387 MEMO1P4-201ENST00000453590 386 ntBASIC6.64□□□□□ -1.35
TOP1P11387 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.64□□□□□ -1.35
TOP1P11387 RN7SL466P-201ENST00000497546 295 ntBASIC6.64□□□□□ -1.35
TOP1P11387 RPS26P24-201ENST00000497656 331 ntBASIC6.64□□□□□ -1.35
TOP1P11387 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.64□□□□□ -1.35
TOP1P11387 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.64□□□□□ -1.35
TOP1P11387 MIR1273E-201ENST00000581165 102 ntBASIC6.64□□□□□ -1.35
TOP1P11387 AC060780.2-201ENST00000589047 198 ntBASIC6.64□□□□□ -1.35
TOP1P11387 AL589674.2-201ENST00000604304 337 ntBASIC6.64□□□□□ -1.35
TOP1P11387 MIR6768-201ENST00000610734 72 ntBASIC6.64□□□□□ -1.35
TOP1P11387 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.64□□□□□ -1.35
TOP1P11387 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.64□□□□□ -1.35
TOP1P11387 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
TOP1P11387 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TOP1P11387 AL355488.2-201ENST00000609909 2850 ntBASIC6.64□□□□□ -1.35
TOP1P11387 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
TOP1P11387 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
TOP1P11387 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
TOP1P11387 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
TOP1P11387 LINC01963-201ENST00000562038 3148 ntBASIC6.63□□□□□ -1.35
TOP1P11387 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TOP1P11387 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TOP1P11387 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TOP1P11387 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms