Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.07□□□□□ -1.6
FREM3P0C091 AC123769.1-201ENST00000530992 3192 ntBASIC5.07□□□□□ -1.6
FREM3P0C091 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
FREM3P0C091 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
FREM3P0C091 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC5.07□□□□□ -1.6
FREM3P0C091 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
FREM3P0C091 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
FREM3P0C091 AC016769.2-201ENST00000414815 475 ntBASIC5.07□□□□□ -1.6
FREM3P0C091 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
FREM3P0C091 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.07□□□□□ -1.6
FREM3P0C091 YWHAEP1-201ENST00000453697 763 ntBASIC5.07□□□□□ -1.6
FREM3P0C091 RPL7P6-201ENST00000480903 738 ntBASIC5.07□□□□□ -1.6
FREM3P0C091 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.07□□□□□ -1.6
FREM3P0C091 RPEP1-201ENST00000504507 658 ntBASIC5.07□□□□□ -1.6
FREM3P0C091 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
FREM3P0C091 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.07□□□□□ -1.6
FREM3P0C091 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.07□□□□□ -1.6
FREM3P0C091 AL691477.1-201ENST00000624398 162 ntBASIC5.07□□□□□ -1.6
FREM3P0C091 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.07□□□□□ -1.6
FREM3P0C091 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
FREM3P0C091 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
FREM3P0C091 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC5.07□□□□□ -1.6
FREM3P0C091 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
FREM3P0C091 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
FREM3P0C091 MSL3P1-202ENST00000440028 1468 ntBASIC5.07□□□□□ -1.6
FREM3P0C091 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
FREM3P0C091 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.06□□□□□ -1.6
FREM3P0C091 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
FREM3P0C091 AC114774.1-201ENST00000507410 1770 ntBASIC5.06□□□□□ -1.6
FREM3P0C091 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.06□□□□□ -1.6
FREM3P0C091 NENFP1-201ENST00000419476 466 ntBASIC5.06□□□□□ -1.6
FREM3P0C091 AC079355.1-201ENST00000421770 223 ntBASIC5.06□□□□□ -1.6
FREM3P0C091 VN1R21P-201ENST00000426703 765 ntBASIC5.06□□□□□ -1.6
FREM3P0C091 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
FREM3P0C091 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.06□□□□□ -1.6
FREM3P0C091 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.06□□□□□ -1.6
FREM3P0C091 LDHBP2-201ENST00000456969 1005 ntBASIC5.06□□□□□ -1.6
FREM3P0C091 RPS4XP1-201ENST00000482189 787 ntBASIC5.06□□□□□ -1.6
FREM3P0C091 RPS7P6-201ENST00000485777 579 ntBASIC5.06□□□□□ -1.6
FREM3P0C091 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.06□□□□□ -1.6
FREM3P0C091 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.06□□□□□ -1.6
FREM3P0C091 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.06□□□□□ -1.6
FREM3P0C091 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.06□□□□□ -1.6
FREM3P0C091 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.06□□□□□ -1.6
FREM3P0C091 AC007225.2-201ENST00000562529 256 ntBASIC5.06□□□□□ -1.6
FREM3P0C091 AP001496.3-201ENST00000580230 913 ntBASIC5.06□□□□□ -1.6
FREM3P0C091 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.06□□□□□ -1.6
FREM3P0C091 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.06□□□□□ -1.6
FREM3P0C091 AL121612.2-201ENST00000612261 482 ntBASIC5.06□□□□□ -1.6
FREM3P0C091 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.06□□□□□ -1.6
FREM3P0C091 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.06□□□□□ -1.6
FREM3P0C091 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
FREM3P0C091 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
FREM3P0C091 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
FREM3P0C091 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
FREM3P0C091 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
FREM3P0C091 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
FREM3P0C091 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
FREM3P0C091 AL669831.5-218ENST00000591702 1873 ntBASIC5.06□□□□□ -1.6
FREM3P0C091 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
FREM3P0C091 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
FREM3P0C091 RN7SKP28-201ENST00000364770 305 ntBASIC5.06□□□□□ -1.6
FREM3P0C091 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
FREM3P0C091 BX276092.6-201ENST00000430476 250 ntBASIC5.06□□□□□ -1.6
FREM3P0C091 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.06□□□□□ -1.6
FREM3P0C091 NANOGP9-201ENST00000439890 892 ntBASIC5.06□□□□□ -1.6
FREM3P0C091 RPS23P9-201ENST00000448848 438 ntBASIC5.06□□□□□ -1.6
FREM3P0C091 BX276092.8-201ENST00000455722 250 ntBASIC5.06□□□□□ -1.6
FREM3P0C091 OR2AO1P-201ENST00000476497 403 ntBASIC5.06□□□□□ -1.6
FREM3P0C091 EIF3LP3-201ENST00000495197 822 ntBASIC5.06□□□□□ -1.6
FREM3P0C091 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.06□□□□□ -1.6
FREM3P0C091 IGLV3-24-201ENST00000517477 197 ntBASIC5.06□□□□□ -1.6
FREM3P0C091 AC078899.1-201ENST00000521432 1185 ntBASIC5.06□□□□□ -1.6
FREM3P0C091 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC5.06□□□□□ -1.6
FREM3P0C091 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.06□□□□□ -1.6
FREM3P0C091 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.06□□□□□ -1.6
FREM3P0C091 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.06□□□□□ -1.6
FREM3P0C091 AC087783.2-201ENST00000605070 562 ntBASIC5.06□□□□□ -1.6
FREM3P0C091 AC016769.4-201ENST00000616893 535 ntBASIC5.06□□□□□ -1.6
FREM3P0C091 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.06□□□□□ -1.6
FREM3P0C091 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.06□□□□□ -1.6
FREM3P0C091 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
FREM3P0C091 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.06□□□□□ -1.6
FREM3P0C091 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
FREM3P0C091 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
FREM3P0C091 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
FREM3P0C091 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
FREM3P0C091 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
FREM3P0C091 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
FREM3P0C091 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
FREM3P0C091 SNORD56.6-201ENST00000384569 71 ntBASIC5.05□□□□□ -1.6
FREM3P0C091 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.05□□□□□ -1.6
FREM3P0C091 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.05□□□□□ -1.6
FREM3P0C091 HAUS8P1-201ENST00000549005 542 ntBASIC5.05□□□□□ -1.6
FREM3P0C091 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.05□□□□□ -1.6
FREM3P0C091 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.05□□□□□ -1.6
FREM3P0C091 DHFRP1-201ENST00000579682 559 ntBASIC5.05□□□□□ -1.6
FREM3P0C091 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.05□□□□□ -1.6
FREM3P0C091 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.05□□□□□ -1.6
FREM3P0C091 AC025857.2-201ENST00000602711 238 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms