Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.33□□□□□ -1.4
MMP3P08254 RPS23P2-201ENST00000463671 415 ntBASIC6.33□□□□□ -1.4
MMP3P08254 RN7SL51P-201ENST00000468230 285 ntBASIC6.33□□□□□ -1.4
MMP3P08254 DUTP1-201ENST00000493631 470 ntBASIC6.33□□□□□ -1.4
MMP3P08254 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC6.33□□□□□ -1.4
MMP3P08254 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.33□□□□□ -1.4
MMP3P08254 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.33□□□□□ -1.4
MMP3P08254 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
MMP3P08254 RNU4-18P-201ENST00000516751 149 ntBASIC6.33□□□□□ -1.4
MMP3P08254 AC021733.2-201ENST00000518830 497 ntBASIC6.33□□□□□ -1.4
MMP3P08254 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
MMP3P08254 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.33□□□□□ -1.4
MMP3P08254 AC044860.2-201ENST00000561005 179 ntBASIC6.33□□□□□ -1.4
MMP3P08254 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.33□□□□□ -1.4
MMP3P08254 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC6.33□□□□□ -1.4
MMP3P08254 AC023389.2-201ENST00000580031 955 ntBASIC6.33□□□□□ -1.4
MMP3P08254 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.33□□□□□ -1.4
MMP3P08254 AC005224.3-201ENST00000584683 2140 ntBASIC6.33□□□□□ -1.4
MMP3P08254 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.33□□□□□ -1.4
MMP3P08254 AC012616.1-201ENST00000600294 197 ntBASIC6.33□□□□□ -1.4
MMP3P08254 AL512329.2-201ENST00000607350 548 ntBASIC6.33□□□□□ -1.4
MMP3P08254 AC073575.2-201ENST00000614212 627 ntBASIC6.33□□□□□ -1.4
MMP3P08254 AC073592.7-201ENST00000623659 507 ntBASIC6.33□□□□□ -1.4
MMP3P08254 AC136428.4-201ENST00000634254 1155 ntBASIC6.33□□□□□ -1.4
MMP3P08254 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
MMP3P08254 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
MMP3P08254 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.33□□□□□ -1.4
MMP3P08254 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.33□□□□□ -1.4
MMP3P08254 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
MMP3P08254 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
MMP3P08254 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.33□□□□□ -1.4
MMP3P08254 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
MMP3P08254 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
MMP3P08254 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
MMP3P08254 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
MMP3P08254 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
MMP3P08254 AL161912.4-201ENST00000623889 2468 ntBASIC6.32□□□□□ -1.4
MMP3P08254 RNA5SP183-201ENST00000362452 119 ntBASIC6.32□□□□□ -1.4
MMP3P08254 RNU4-2-201ENST00000365668 141 ntBASIC6.32□□□□□ -1.4
MMP3P08254 PTMAP6-201ENST00000439110 327 ntBASIC6.32□□□□□ -1.4
MMP3P08254 XKRYP6-201ENST00000440468 1116 ntBASIC6.32□□□□□ -1.4
MMP3P08254 XKRYP3-201ENST00000442113 1116 ntBASIC6.32□□□□□ -1.4
MMP3P08254 TPRKBP1-201ENST00000456243 481 ntBASIC6.32□□□□□ -1.4
MMP3P08254 RPS4XP1-201ENST00000482189 787 ntBASIC6.32□□□□□ -1.4
MMP3P08254 AC008953.1-201ENST00000497334 318 ntBASIC6.32□□□□□ -1.4
MMP3P08254 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
MMP3P08254 AC093763.2-201ENST00000505334 1223 ntBASIC6.32□□□□□ -1.4
MMP3P08254 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.32□□□□□ -1.4
MMP3P08254 OR5M14P-201ENST00000506803 618 ntBASIC6.32□□□□□ -1.4
MMP3P08254 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.32□□□□□ -1.4
MMP3P08254 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.32□□□□□ -1.4
MMP3P08254 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
MMP3P08254 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.32□□□□□ -1.4
MMP3P08254 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
MMP3P08254 AC087468.1-201ENST00000604365 630 ntBASIC6.32□□□□□ -1.4
MMP3P08254 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC6.32□□□□□ -1.4
MMP3P08254 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC6.32□□□□□ -1.4
MMP3P08254 AP003400.2-201ENST00000624036 666 ntBASIC6.32□□□□□ -1.4
MMP3P08254 SAMMSON-227ENST00000642114 1199 ntBASIC6.32□□□□□ -1.4
MMP3P08254 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
MMP3P08254 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.32□□□□□ -1.4
MMP3P08254 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
MMP3P08254 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
MMP3P08254 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.32□□□□□ -1.4
MMP3P08254 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
MMP3P08254 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.32□□□□□ -1.4
MMP3P08254 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.32□□□□□ -1.4
MMP3P08254 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
MMP3P08254 AP000866.6-201ENST00000638898 3579 ntBASIC6.32□□□□□ -1.4
MMP3P08254 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
MMP3P08254 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
MMP3P08254 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
MMP3P08254 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
MMP3P08254 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.31□□□□□ -1.4
MMP3P08254 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
MMP3P08254 AL161756.3-201ENST00000641216 2071 ntBASIC6.31□□□□□ -1.4
MMP3P08254 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
MMP3P08254 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
MMP3P08254 AL136116.2-201ENST00000404020 785 ntBASIC6.31□□□□□ -1.4
MMP3P08254 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.31□□□□□ -1.4
MMP3P08254 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC6.31□□□□□ -1.4
MMP3P08254 CNOT7P2-201ENST00000441051 832 ntBASIC6.31□□□□□ -1.4
MMP3P08254 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC6.31□□□□□ -1.4
MMP3P08254 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.31□□□□□ -1.4
MMP3P08254 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.31□□□□□ -1.4
MMP3P08254 OSTCP1-201ENST00000455507 450 ntBASIC6.31□□□□□ -1.4
MMP3P08254 AL355032.1-201ENST00000472981 438 ntBASIC6.31□□□□□ -1.4
MMP3P08254 AGGF1P3-201ENST00000493675 1213 ntBASIC6.31□□□□□ -1.4
MMP3P08254 HIGD1AP14-201ENST00000507617 282 ntBASIC6.31□□□□□ -1.4
MMP3P08254 CCNHP1-201ENST00000513311 678 ntBASIC6.31□□□□□ -1.4
MMP3P08254 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC6.31□□□□□ -1.4
MMP3P08254 AP006245.2-201ENST00000522004 300 ntBASIC6.31□□□□□ -1.4
MMP3P08254 AL121594.2-201ENST00000541658 472 ntBASIC6.31□□□□□ -1.4
MMP3P08254 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.31□□□□□ -1.4
MMP3P08254 AC234775.3-201ENST00000564612 656 ntBASIC6.31□□□□□ -1.4
MMP3P08254 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.31□□□□□ -1.4
MMP3P08254 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.31□□□□□ -1.4
MMP3P08254 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.31□□□□□ -1.4
MMP3P08254 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.31□□□□□ -1.4
MMP3P08254 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms