Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.49□□□□□ -1.53
TNFP01375 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.49□□□□□ -1.53
TNFP01375 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.49□□□□□ -1.53
TNFP01375 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
TNFP01375 AC025574.2-201ENST00000615621 514 ntBASIC5.49□□□□□ -1.53
TNFP01375 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.49□□□□□ -1.53
TNFP01375 AC004808.2-201ENST00000627965 773 ntBASIC5.49□□□□□ -1.53
TNFP01375 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.49□□□□□ -1.53
TNFP01375 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TNFP01375 MT-RNR2-201ENST00000387347 1559 ntBASIC5.49□□□□□ -1.53
TNFP01375 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.49□□□□□ -1.53
TNFP01375 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.49□□□□□ -1.53
TNFP01375 AC073365.1-203ENST00000641055 1992 ntBASIC5.49□□□□□ -1.53
TNFP01375 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TNFP01375 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TNFP01375 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TNFP01375 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
TNFP01375 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
TNFP01375 ZNF101P1-201ENST00000435701 1720 ntBASIC5.48□□□□□ -1.53
TNFP01375 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
TNFP01375 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.48□□□□□ -1.53
TNFP01375 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TNFP01375 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TNFP01375 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.48□□□□□ -1.53
TNFP01375 ZNF969P-201ENST00000510345 2341 ntBASIC5.48□□□□□ -1.53
TNFP01375 AC068769.1-201ENST00000474767 2426 ntBASIC5.48□□□□□ -1.53
TNFP01375 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
TNFP01375 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TNFP01375 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.48□□□□□ -1.53
TNFP01375 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.48□□□□□ -1.53
TNFP01375 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
TNFP01375 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TNFP01375 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
TNFP01375 U3.7-201ENST00000363668 216 ntBASIC5.48□□□□□ -1.53
TNFP01375 RNA5SP234-201ENST00000363916 119 ntBASIC5.48□□□□□ -1.53
TNFP01375 RNU1-59P-201ENST00000364829 162 ntBASIC5.48□□□□□ -1.53
TNFP01375 GNG5P2-201ENST00000372054 207 ntBASIC5.48□□□□□ -1.53
TNFP01375 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.48□□□□□ -1.53
TNFP01375 AC011225.1-201ENST00000457751 369 ntBASIC5.48□□□□□ -1.53
TNFP01375 RN7SL30P-201ENST00000488416 306 ntBASIC5.48□□□□□ -1.53
TNFP01375 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.48□□□□□ -1.53
TNFP01375 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.48□□□□□ -1.53
TNFP01375 AC021146.10-201ENST00000515628 706 ntBASIC5.48□□□□□ -1.53
TNFP01375 PMS2P3-207ENST00000529061 717 ntBASIC5.48□□□□□ -1.53
TNFP01375 AC004825.1-201ENST00000555068 586 ntBASIC5.48□□□□□ -1.53
TNFP01375 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.48□□□□□ -1.53
TNFP01375 DHFRP1-201ENST00000579682 559 ntBASIC5.48□□□□□ -1.53
TNFP01375 H3F3BP2-201ENST00000583907 357 ntBASIC5.48□□□□□ -1.53
TNFP01375 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.48□□□□□ -1.53
TNFP01375 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.48□□□□□ -1.53
TNFP01375 U1.25-201ENST00000614085 162 ntBASIC5.48□□□□□ -1.53
TNFP01375 U1.34-201ENST00000618578 162 ntBASIC5.48□□□□□ -1.53
TNFP01375 U1.31-201ENST00000620022 160 ntBASIC5.48□□□□□ -1.53
TNFP01375 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
TNFP01375 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.48□□□□□ -1.53
TNFP01375 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
TNFP01375 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC5.48□□□□□ -1.53
TNFP01375 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
TNFP01375 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.48□□□□□ -1.53
TNFP01375 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TNFP01375 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TNFP01375 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TNFP01375 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
TNFP01375 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
TNFP01375 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
TNFP01375 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TNFP01375 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TNFP01375 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TNFP01375 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
TNFP01375 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TNFP01375 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
TNFP01375 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.47□□□□□ -1.53
TNFP01375 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
TNFP01375 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TNFP01375 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.47□□□□□ -1.53
TNFP01375 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.47□□□□□ -1.53
TNFP01375 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TNFP01375 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.47□□□□□ -1.53
TNFP01375 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.47□□□□□ -1.53
TNFP01375 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TNFP01375 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.47□□□□□ -1.53
TNFP01375 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.47□□□□□ -1.53
TNFP01375 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.47□□□□□ -1.53
TNFP01375 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.47□□□□□ -1.53
TNFP01375 RPL7L1P9-201ENST00000431298 745 ntBASIC5.47□□□□□ -1.53
TNFP01375 OR6D1P-201ENST00000436165 939 ntBASIC5.47□□□□□ -1.53
TNFP01375 CYCSP12-201ENST00000437729 300 ntBASIC5.47□□□□□ -1.53
TNFP01375 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.47□□□□□ -1.53
TNFP01375 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TNFP01375 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.47□□□□□ -1.53
TNFP01375 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
TNFP01375 AC078878.1-201ENST00000539832 958 ntBASIC5.47□□□□□ -1.53
TNFP01375 AC016180.1-201ENST00000567945 403 ntBASIC5.47□□□□□ -1.53
TNFP01375 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
TNFP01375 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.47□□□□□ -1.53
TNFP01375 OR7E18P-201ENST00000592589 702 ntBASIC5.47□□□□□ -1.53
TNFP01375 IMMP1LP3-201ENST00000604197 224 ntBASIC5.47□□□□□ -1.53
TNFP01375 AL118522.2-201ENST00000616045 615 ntBASIC5.47□□□□□ -1.53
TNFP01375 AC008115.4-201ENST00000619780 775 ntBASIC5.47□□□□□ -1.53
TNFP01375 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms