Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.19□□□□□ -1.58
LMX1BO60663 DNAJC19P5-201ENST00000443295 316 ntBASIC5.19□□□□□ -1.58
LMX1BO60663 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
LMX1BO60663 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LMX1BO60663 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.19□□□□□ -1.58
LMX1BO60663 NPM1P19-201ENST00000450070 712 ntBASIC5.19□□□□□ -1.58
LMX1BO60663 AL353718.1-201ENST00000451028 517 ntBASIC5.19□□□□□ -1.58
LMX1BO60663 CFL1P4-201ENST00000451536 498 ntBASIC5.19□□□□□ -1.58
LMX1BO60663 MTCYBP14-201ENST00000457471 715 ntBASIC5.19□□□□□ -1.58
LMX1BO60663 RN7SL177P-201ENST00000476596 299 ntBASIC5.19□□□□□ -1.58
LMX1BO60663 RPS4XP14-201ENST00000493072 781 ntBASIC5.19□□□□□ -1.58
LMX1BO60663 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.19□□□□□ -1.58
LMX1BO60663 ST13P12-201ENST00000508958 1094 ntBASIC5.19□□□□□ -1.58
LMX1BO60663 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.19□□□□□ -1.58
LMX1BO60663 AC090958.1-201ENST00000511122 351 ntBASIC5.19□□□□□ -1.58
LMX1BO60663 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.19□□□□□ -1.58
LMX1BO60663 RPL7L1P4-201ENST00000513004 707 ntBASIC5.19□□□□□ -1.58
LMX1BO60663 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LMX1BO60663 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC5.19□□□□□ -1.58
LMX1BO60663 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.19□□□□□ -1.58
LMX1BO60663 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LMX1BO60663 OR10D4P-201ENST00000525892 951 ntBASIC5.19□□□□□ -1.58
LMX1BO60663 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.19□□□□□ -1.58
LMX1BO60663 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.19□□□□□ -1.58
LMX1BO60663 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.19□□□□□ -1.58
LMX1BO60663 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.19□□□□□ -1.58
LMX1BO60663 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LMX1BO60663 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.19□□□□□ -1.58
LMX1BO60663 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.19□□□□□ -1.58
LMX1BO60663 AC245884.10-201ENST00000597355 337 ntBASIC5.19□□□□□ -1.58
LMX1BO60663 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.19□□□□□ -1.58
LMX1BO60663 AC016590.3-201ENST00000611171 753 ntBASIC5.19□□□□□ -1.58
LMX1BO60663 AC104763.3-201ENST00000613765 618 ntBASIC5.19□□□□□ -1.58
LMX1BO60663 AC126175.1-201ENST00000617041 758 ntBASIC5.19□□□□□ -1.58
LMX1BO60663 AL512652.1-201ENST00000619006 500 ntBASIC5.19□□□□□ -1.58
LMX1BO60663 AC109809.1-201ENST00000619665 545 ntBASIC5.19□□□□□ -1.58
LMX1BO60663 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.19□□□□□ -1.58
LMX1BO60663 AC090772.4-201ENST00000623599 362 ntBASIC5.19□□□□□ -1.58
LMX1BO60663 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.19□□□□□ -1.58
LMX1BO60663 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.19□□□□□ -1.58
LMX1BO60663 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
LMX1BO60663 AC006927.4-201ENST00000639187 543 ntBASIC5.19□□□□□ -1.58
LMX1BO60663 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
LMX1BO60663 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LMX1BO60663 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LMX1BO60663 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
LMX1BO60663 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LMX1BO60663 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.19□□□□□ -1.58
LMX1BO60663 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
LMX1BO60663 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LMX1BO60663 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LMX1BO60663 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
LMX1BO60663 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
LMX1BO60663 AC130304.1-201ENST00000622942 2385 ntBASIC5.19□□□□□ -1.58
LMX1BO60663 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LMX1BO60663 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LMX1BO60663 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.18□□□□□ -1.58
LMX1BO60663 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LMX1BO60663 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.18□□□□□ -1.58
LMX1BO60663 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LMX1BO60663 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LMX1BO60663 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LMX1BO60663 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LMX1BO60663 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LMX1BO60663 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LMX1BO60663 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LMX1BO60663 AC093297.3-201ENST00000607056 2517 ntBASIC5.18□□□□□ -1.58
LMX1BO60663 AL355834.1-201ENST00000556602 3965 ntBASIC5.18□□□□□ -1.58
LMX1BO60663 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LMX1BO60663 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LMX1BO60663 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
LMX1BO60663 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LMX1BO60663 RNU1-134P-201ENST00000362935 165 ntBASIC5.18□□□□□ -1.58
LMX1BO60663 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
LMX1BO60663 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.18□□□□□ -1.58
LMX1BO60663 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
LMX1BO60663 AL132875.1-201ENST00000403623 949 ntBASIC5.18□□□□□ -1.58
LMX1BO60663 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LMX1BO60663 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.18□□□□□ -1.58
LMX1BO60663 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.18□□□□□ -1.58
LMX1BO60663 NMD3P2-201ENST00000421815 761 ntBASIC5.18□□□□□ -1.58
LMX1BO60663 AK3P5-201ENST00000432033 519 ntBASIC5.18□□□□□ -1.58
LMX1BO60663 AC023141.3-201ENST00000436698 278 ntBASIC5.18□□□□□ -1.58
LMX1BO60663 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.18□□□□□ -1.58
LMX1BO60663 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LMX1BO60663 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.18□□□□□ -1.58
LMX1BO60663 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LMX1BO60663 CST12P-201ENST00000457644 362 ntBASIC5.18□□□□□ -1.58
LMX1BO60663 EIF2S2P4-201ENST00000461070 984 ntBASIC5.18□□□□□ -1.58
LMX1BO60663 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.18□□□□□ -1.58
LMX1BO60663 AC093827.1-201ENST00000480094 861 ntBASIC5.18□□□□□ -1.58
LMX1BO60663 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LMX1BO60663 AC118282.1-201ENST00000506408 765 ntBASIC5.18□□□□□ -1.58
LMX1BO60663 AC010460.2-201ENST00000509054 677 ntBASIC5.18□□□□□ -1.58
LMX1BO60663 MTATP6P9-201ENST00000515039 680 ntBASIC5.18□□□□□ -1.58
LMX1BO60663 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.18□□□□□ -1.58
LMX1BO60663 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.18□□□□□ -1.58
LMX1BO60663 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.18□□□□□ -1.58
LMX1BO60663 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.18□□□□□ -1.58
LMX1BO60663 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms