Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC090804.1-201ENST00000448870 490 ntBASIC4.46□□□□□ -1.7
SSSCA1O60232 OR52I1-201ENST00000450052 1050 ntBASIC4.46□□□□□ -1.7
SSSCA1O60232 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC4.46□□□□□ -1.7
SSSCA1O60232 AC005017.1-201ENST00000482002 490 ntBASIC4.46□□□□□ -1.7
SSSCA1O60232 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC4.46□□□□□ -1.7
SSSCA1O60232 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC4.46□□□□□ -1.7
SSSCA1O60232 IMPA1P1-201ENST00000510718 842 ntBASIC4.46□□□□□ -1.7
SSSCA1O60232 SETP21-201ENST00000514799 892 ntBASIC4.46□□□□□ -1.7
SSSCA1O60232 MAL2-207ENST00000522828 603 ntTSL 3 BASIC4.46□□□□□ -1.7
SSSCA1O60232 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC4.46□□□□□ -1.7
SSSCA1O60232 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.46□□□□□ -1.7
SSSCA1O60232 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.46□□□□□ -1.7
SSSCA1O60232 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.46□□□□□ -1.7
SSSCA1O60232 AC004232.2-201ENST00000574245 821 ntBASIC4.46□□□□□ -1.7
SSSCA1O60232 AC005244.1-201ENST00000582566 339 ntBASIC4.46□□□□□ -1.7
SSSCA1O60232 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SSSCA1O60232 AC009237.13-201ENST00000603193 276 ntBASIC4.46□□□□□ -1.7
SSSCA1O60232 AC083964.1-201ENST00000607549 630 ntBASIC4.46□□□□□ -1.7
SSSCA1O60232 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC4.46□□□□□ -1.7
SSSCA1O60232 AC004817.4-201ENST00000602396 3625 ntBASIC4.46□□□□□ -1.7
SSSCA1O60232 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
SSSCA1O60232 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.46□□□□□ -1.7
SSSCA1O60232 AC015689.2-201ENST00000528172 1738 ntBASIC4.46□□□□□ -1.7
SSSCA1O60232 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SSSCA1O60232 QRSL1P1-201ENST00000400977 1540 ntBASIC4.46□□□□□ -1.7
SSSCA1O60232 THAP12P5-201ENST00000405864 2275 ntBASIC4.46□□□□□ -1.7
SSSCA1O60232 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SSSCA1O60232 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SSSCA1O60232 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
SSSCA1O60232 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
SSSCA1O60232 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SSSCA1O60232 AC005261.2-201ENST00000593427 4258 ntBASIC4.45□□□□□ -1.7
SSSCA1O60232 AP001284.1-201ENST00000528393 2118 ntBASIC4.45□□□□□ -1.7
SSSCA1O60232 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.45□□□□□ -1.7
SSSCA1O60232 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SSSCA1O60232 PDZK1P1-202ENST00000425209 1350 ntBASIC4.45□□□□□ -1.7
SSSCA1O60232 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SSSCA1O60232 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SSSCA1O60232 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
SSSCA1O60232 AL159987.1-201ENST00000347911 293 ntBASIC4.45□□□□□ -1.7
SSSCA1O60232 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SSSCA1O60232 PKIB-203ENST00000368446 556 ntTSL 2 BASIC4.45□□□□□ -1.7
SSSCA1O60232 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SSSCA1O60232 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SSSCA1O60232 AL009179.1-201ENST00000406085 265 ntBASIC4.45□□□□□ -1.7
SSSCA1O60232 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SSSCA1O60232 AC211486.3-201ENST00000412694 621 ntBASIC4.45□□□□□ -1.7
SSSCA1O60232 MRPL53P1-201ENST00000414323 319 ntBASIC4.45□□□□□ -1.7
SSSCA1O60232 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.45□□□□□ -1.7
SSSCA1O60232 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC4.45□□□□□ -1.7
SSSCA1O60232 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SSSCA1O60232 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
SSSCA1O60232 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC4.45□□□□□ -1.7
SSSCA1O60232 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
SSSCA1O60232 AC021660.1-201ENST00000465006 554 ntBASIC4.45□□□□□ -1.7
SSSCA1O60232 AC098847.1-201ENST00000473094 348 ntBASIC4.45□□□□□ -1.7
SSSCA1O60232 RN7SL583P-201ENST00000475692 287 ntBASIC4.45□□□□□ -1.7
SSSCA1O60232 AC069304.1-201ENST00000491593 704 ntBASIC4.45□□□□□ -1.7
SSSCA1O60232 AC122714.1-201ENST00000502510 459 ntBASIC4.45□□□□□ -1.7
SSSCA1O60232 USP9YP2-201ENST00000504503 1000 ntBASIC4.45□□□□□ -1.7
SSSCA1O60232 AC113367.2-201ENST00000505749 160 ntBASIC4.45□□□□□ -1.7
SSSCA1O60232 USP9YP1-201ENST00000513521 1002 ntBASIC4.45□□□□□ -1.7
SSSCA1O60232 PRMT5P1-201ENST00000514351 598 ntBASIC4.45□□□□□ -1.7
SSSCA1O60232 EIF3KP3-201ENST00000514461 639 ntBASIC4.45□□□□□ -1.7
SSSCA1O60232 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SSSCA1O60232 RNA5SP441-201ENST00000516809 88 ntBASIC4.45□□□□□ -1.7
SSSCA1O60232 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.45□□□□□ -1.7
SSSCA1O60232 AC020937.1-201ENST00000519677 1013 ntBASIC4.45□□□□□ -1.7
SSSCA1O60232 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.45□□□□□ -1.7
SSSCA1O60232 CASP5-209ENST00000531367 879 ntTSL 5 BASIC4.45□□□□□ -1.7
SSSCA1O60232 AC006349.1-201ENST00000555526 235 ntBASIC4.45□□□□□ -1.7
SSSCA1O60232 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC4.45□□□□□ -1.7
SSSCA1O60232 AC040958.1-201ENST00000561102 201 ntBASIC4.45□□□□□ -1.7
SSSCA1O60232 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC4.45□□□□□ -1.7
SSSCA1O60232 OOSP1P2-201ENST00000579644 351 ntBASIC4.45□□□□□ -1.7
SSSCA1O60232 MIR4472-2-201ENST00000582069 67 ntBASIC4.45□□□□□ -1.7
SSSCA1O60232 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC4.45□□□□□ -1.7
SSSCA1O60232 AC015819.1-201ENST00000613588 663 ntBASIC4.45□□□□□ -1.7
SSSCA1O60232 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.45□□□□□ -1.7
SSSCA1O60232 AL357140.4-201ENST00000636827 412 ntBASIC4.45□□□□□ -1.7
SSSCA1O60232 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.45□□□□□ -1.7
SSSCA1O60232 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.45□□□□□ -1.7
SSSCA1O60232 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SSSCA1O60232 LINC02019-201ENST00000608605 2060 ntBASIC4.45□□□□□ -1.7
SSSCA1O60232 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SSSCA1O60232 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.45□□□□□ -1.7
SSSCA1O60232 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.45□□□□□ -1.7
SSSCA1O60232 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.45□□□□□ -1.7
SSSCA1O60232 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SSSCA1O60232 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.45□□□□□ -1.7
SSSCA1O60232 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SSSCA1O60232 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.45□□□□□ -1.7
SSSCA1O60232 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSSCA1O60232 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.44□□□□□ -1.7
SSSCA1O60232 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.44□□□□□ -1.7
SSSCA1O60232 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.44□□□□□ -1.7
SSSCA1O60232 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.44□□□□□ -1.7
SSSCA1O60232 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC4.44□□□□□ -1.7
SSSCA1O60232 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSSCA1O60232 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms