Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.3□□□□□ -1.56
UPK1AO00322 AC079064.1-201ENST00000528365 362 ntBASIC5.3□□□□□ -1.56
UPK1AO00322 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.3□□□□□ -1.56
UPK1AO00322 HSPE1P2-201ENST00000554777 306 ntBASIC5.3□□□□□ -1.56
UPK1AO00322 DPPA2P4-201ENST00000563717 878 ntBASIC5.3□□□□□ -1.56
UPK1AO00322 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.3□□□□□ -1.56
UPK1AO00322 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.3□□□□□ -1.56
UPK1AO00322 RN7SL544P-201ENST00000617232 284 ntBASIC5.3□□□□□ -1.56
UPK1AO00322 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
UPK1AO00322 RN7SL763P-201ENST00000620922 284 ntBASIC5.3□□□□□ -1.56
UPK1AO00322 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
UPK1AO00322 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.3□□□□□ -1.56
UPK1AO00322 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
UPK1AO00322 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
UPK1AO00322 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
UPK1AO00322 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.3□□□□□ -1.56
UPK1AO00322 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
UPK1AO00322 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
UPK1AO00322 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
UPK1AO00322 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.3□□□□□ -1.56
UPK1AO00322 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
UPK1AO00322 OR4F13P-202ENST00000560066 2054 ntBASIC5.3□□□□□ -1.56
UPK1AO00322 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
UPK1AO00322 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.29□□□□□ -1.56
UPK1AO00322 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
UPK1AO00322 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.29□□□□□ -1.56
UPK1AO00322 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
UPK1AO00322 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.29□□□□□ -1.56
UPK1AO00322 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
UPK1AO00322 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.29□□□□□ -1.56
UPK1AO00322 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
UPK1AO00322 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
UPK1AO00322 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
UPK1AO00322 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
UPK1AO00322 MIR375-201ENST00000362103 64 ntBASIC5.29□□□□□ -1.56
UPK1AO00322 U3.7-201ENST00000363668 216 ntBASIC5.29□□□□□ -1.56
UPK1AO00322 LYPLA1P3-201ENST00000402650 695 ntBASIC5.29□□□□□ -1.56
UPK1AO00322 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.29□□□□□ -1.56
UPK1AO00322 RPS3AP2-201ENST00000407190 754 ntBASIC5.29□□□□□ -1.56
UPK1AO00322 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC5.29□□□□□ -1.56
UPK1AO00322 RNF10P1-201ENST00000418589 369 ntBASIC5.29□□□□□ -1.56
UPK1AO00322 AC127526.2-201ENST00000426436 775 ntBASIC5.29□□□□□ -1.56
UPK1AO00322 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.29□□□□□ -1.56
UPK1AO00322 RPS23P6-201ENST00000466136 431 ntBASIC5.29□□□□□ -1.56
UPK1AO00322 EIF3LP3-201ENST00000495197 822 ntBASIC5.29□□□□□ -1.56
UPK1AO00322 RN7SKP253-201ENST00000516424 309 ntBASIC5.29□□□□□ -1.56
UPK1AO00322 IGLV3-24-201ENST00000517477 197 ntBASIC5.29□□□□□ -1.56
UPK1AO00322 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
UPK1AO00322 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.29□□□□□ -1.56
UPK1AO00322 AC122688.1-201ENST00000541494 223 ntBASIC5.29□□□□□ -1.56
UPK1AO00322 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.29□□□□□ -1.56
UPK1AO00322 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.29□□□□□ -1.56
UPK1AO00322 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.29□□□□□ -1.56
UPK1AO00322 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.29□□□□□ -1.56
UPK1AO00322 AC015802.2-201ENST00000589690 189 ntBASIC5.29□□□□□ -1.56
UPK1AO00322 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.29□□□□□ -1.56
UPK1AO00322 AC008833.1-201ENST00000611633 691 ntBASIC5.29□□□□□ -1.56
UPK1AO00322 AL096712.1-201ENST00000614561 159 ntBASIC5.29□□□□□ -1.56
UPK1AO00322 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
UPK1AO00322 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
UPK1AO00322 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
UPK1AO00322 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
UPK1AO00322 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
UPK1AO00322 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.29□□□□□ -1.56
UPK1AO00322 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.29□□□□□ -1.56
UPK1AO00322 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
UPK1AO00322 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.29□□□□□ -1.56
UPK1AO00322 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
UPK1AO00322 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
UPK1AO00322 PWAR1-201ENST00000624188 2414 ntBASIC5.28□□□□□ -1.56
UPK1AO00322 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
UPK1AO00322 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
UPK1AO00322 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
UPK1AO00322 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
UPK1AO00322 CDY3P-201ENST00000454543 1618 ntBASIC5.28□□□□□ -1.56
UPK1AO00322 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
UPK1AO00322 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
UPK1AO00322 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
UPK1AO00322 OR52B3P-201ENST00000314715 928 ntBASIC5.28□□□□□ -1.56
UPK1AO00322 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
UPK1AO00322 SNORA64.1-201ENST00000362600 132 ntBASIC5.28□□□□□ -1.56
UPK1AO00322 RPS6P23-201ENST00000413224 722 ntBASIC5.28□□□□□ -1.56
UPK1AO00322 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC5.28□□□□□ -1.56
UPK1AO00322 TMEM183AP1-205ENST00000432739 290 ntBASIC5.28□□□□□ -1.56
UPK1AO00322 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.28□□□□□ -1.56
UPK1AO00322 AC092106.1-201ENST00000444291 373 ntBASIC5.28□□□□□ -1.56
UPK1AO00322 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.28□□□□□ -1.56
UPK1AO00322 MRE11P1-201ENST00000464884 2127 ntBASIC5.28□□□□□ -1.56
UPK1AO00322 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.28□□□□□ -1.56
UPK1AO00322 RPS3AP15-201ENST00000483874 781 ntBASIC5.28□□□□□ -1.56
UPK1AO00322 DUTP7-201ENST00000507982 486 ntBASIC5.28□□□□□ -1.56
UPK1AO00322 AC026782.2-201ENST00000510845 636 ntBASIC5.28□□□□□ -1.56
UPK1AO00322 AC130364.2-201ENST00000528639 604 ntBASIC5.28□□□□□ -1.56
UPK1AO00322 HMGB1P42-201ENST00000532126 553 ntBASIC5.28□□□□□ -1.56
UPK1AO00322 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.28□□□□□ -1.56
UPK1AO00322 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.28□□□□□ -1.56
UPK1AO00322 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.28□□□□□ -1.56
UPK1AO00322 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.28□□□□□ -1.56
UPK1AO00322 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
UPK1AO00322 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms