Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
HDHD3Q9BSH5 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 AP005435.3-201ENST00000531260 3198 ntBASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 AC104966.1-201ENST00000467010 1464 ntBASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 AC083899.1-201ENST00000454465 3819 ntBASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 RNA5SP273-201ENST00000362484 113 ntBASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 RNF10P1-201ENST00000418589 369 ntBASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 NENFP1-201ENST00000419476 466 ntBASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 VTI1BP4-201ENST00000427516 527 ntBASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 ATP6V1E1P1-201ENST00000439215 681 ntBASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 RPL5P25-201ENST00000441148 775 ntBASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 AZGP1P2-201ENST00000454506 345 ntBASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 AC104339.1-201ENST00000465478 348 ntBASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 RBBP4P1-201ENST00000502424 1276 ntBASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 HSD3BP3-201ENST00000514706 994 ntBASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 RNA5SP438-201ENST00000516561 112 ntBASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 AC021733.2-201ENST00000518830 497 ntBASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 AC079905.1-201ENST00000549280 475 ntBASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 CYCSP38-201ENST00000559840 322 ntBASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 AC008507.3-201ENST00000585753 472 ntBASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 AC009237.13-201ENST00000603193 276 ntBASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 AL034549.2-201ENST00000618285 3373 ntBASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HDHD3Q9BSH5 AC003973.3-201ENST00000624863 2822 ntBASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 LYARP1-201ENST00000436977 1501 ntBASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 COX6B1P3-201ENST00000312310 260 ntBASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 RN7SKP184-201ENST00000362348 333 ntBASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 MORN2-202ENST00000409077 465 ntTSL 5 BASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 IGBP1P3-201ENST00000447449 1000 ntBASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 AL596266.1-201ENST00000448132 400 ntBASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 RN7SL583P-201ENST00000475692 287 ntBASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 BLNK-209ENST00000495266 440 ntTSL 5 BASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 RNU6-964P-201ENST00000516524 69 ntBASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 MIR4311-201ENST00000580794 100 ntBASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 AP001437.1-201ENST00000608783 456 ntBASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms