Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
SNX18Q96RF0 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SNX18Q96RF0 RMRPP5-201ENST00000411156 267 ntBASIC5.74□□□□□ -1.49
SNX18Q96RF0 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.74□□□□□ -1.49
SNX18Q96RF0 MTND2P16-201ENST00000419987 799 ntBASIC5.74□□□□□ -1.49
SNX18Q96RF0 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC5.74□□□□□ -1.49
SNX18Q96RF0 LINC00328-2P-201ENST00000436585 219 ntBASIC5.74□□□□□ -1.49
SNX18Q96RF0 AC092106.2-201ENST00000436597 487 ntBASIC5.74□□□□□ -1.49
SNX18Q96RF0 AC245291.3-201ENST00000443400 292 ntBASIC5.74□□□□□ -1.49
SNX18Q96RF0 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.74□□□□□ -1.49
SNX18Q96RF0 AL627224.1-201ENST00000448334 444 ntBASIC5.74□□□□□ -1.49
SNX18Q96RF0 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC5.74□□□□□ -1.49
SNX18Q96RF0 RPL7P61-201ENST00000451721 751 ntBASIC5.74□□□□□ -1.49
SNX18Q96RF0 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.74□□□□□ -1.49
SNX18Q96RF0 RBMY2HP-201ENST00000457961 720 ntBASIC5.74□□□□□ -1.49
SNX18Q96RF0 AC022415.1-202ENST00000486612 523 ntBASIC5.74□□□□□ -1.49
SNX18Q96RF0 AC022206.1-201ENST00000495947 347 ntBASIC5.74□□□□□ -1.49
SNX18Q96RF0 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC5.74□□□□□ -1.49
SNX18Q96RF0 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC5.74□□□□□ -1.49
SNX18Q96RF0 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.74□□□□□ -1.49
SNX18Q96RF0 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SNX18Q96RF0 AC084824.2-201ENST00000548906 345 ntBASIC5.74□□□□□ -1.49
SNX18Q96RF0 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.74□□□□□ -1.49
SNX18Q96RF0 AC005519.1-201ENST00000554490 601 ntBASIC5.74□□□□□ -1.49
SNX18Q96RF0 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.74□□□□□ -1.49
SNX18Q96RF0 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.74□□□□□ -1.49
SNX18Q96RF0 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.74□□□□□ -1.49
SNX18Q96RF0 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.74□□□□□ -1.49
SNX18Q96RF0 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.74□□□□□ -1.49
SNX18Q96RF0 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.74□□□□□ -1.49
SNX18Q96RF0 MIR4433B-201ENST00000581329 102 ntBASIC5.74□□□□□ -1.49
SNX18Q96RF0 AC005726.4-201ENST00000582858 458 ntBASIC5.74□□□□□ -1.49
SNX18Q96RF0 AC090616.1-201ENST00000583895 447 ntBASIC5.74□□□□□ -1.49
SNX18Q96RF0 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC5.74□□□□□ -1.49
SNX18Q96RF0 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.74□□□□□ -1.49
SNX18Q96RF0 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.74□□□□□ -1.49
SNX18Q96RF0 AC004805.3-201ENST00000603178 310 ntBASIC5.74□□□□□ -1.49
SNX18Q96RF0 ELOCP35-201ENST00000604289 336 ntBASIC5.74□□□□□ -1.49
SNX18Q96RF0 AC114477.1-201ENST00000605097 605 ntBASIC5.74□□□□□ -1.49
SNX18Q96RF0 SNORD96A-201ENST00000606577 79 ntBASIC5.74□□□□□ -1.49
SNX18Q96RF0 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.74□□□□□ -1.49
SNX18Q96RF0 MIR6823-201ENST00000622118 61 ntBASIC5.74□□□□□ -1.49
SNX18Q96RF0 FRG1DP-201ENST00000635586 771 ntBASIC5.74□□□□□ -1.49
SNX18Q96RF0 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.74□□□□□ -1.49
SNX18Q96RF0 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
SNX18Q96RF0 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
SNX18Q96RF0 AC022325.1-201ENST00000502748 2199 ntBASIC5.74□□□□□ -1.49
SNX18Q96RF0 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.74□□□□□ -1.49
SNX18Q96RF0 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.74□□□□□ -1.49
SNX18Q96RF0 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.74□□□□□ -1.49
SNX18Q96RF0 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
SNX18Q96RF0 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.74□□□□□ -1.49
SNX18Q96RF0 AC125238.2-201ENST00000430003 1440 ntBASIC5.74□□□□□ -1.49
SNX18Q96RF0 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SNX18Q96RF0 KYNUP3-201ENST00000574386 1341 ntBASIC5.74□□□□□ -1.49
SNX18Q96RF0 AL137058.3-201ENST00000624531 3099 ntBASIC5.73□□□□□ -1.49
SNX18Q96RF0 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SNX18Q96RF0 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.73□□□□□ -1.49
SNX18Q96RF0 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.73□□□□□ -1.49
SNX18Q96RF0 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.73□□□□□ -1.49
SNX18Q96RF0 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.73□□□□□ -1.49
SNX18Q96RF0 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.73□□□□□ -1.49
SNX18Q96RF0 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.73□□□□□ -1.49
SNX18Q96RF0 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SNX18Q96RF0 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
SNX18Q96RF0 Z83820.1-201ENST00000456978 1499 ntBASIC5.73□□□□□ -1.49
SNX18Q96RF0 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SNX18Q96RF0 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.73□□□□□ -1.49
SNX18Q96RF0 ZNF29P-201ENST00000225587 168 ntBASIC5.73□□□□□ -1.49
SNX18Q96RF0 RAD1P1-201ENST00000231383 813 ntBASIC5.73□□□□□ -1.49
SNX18Q96RF0 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SNX18Q96RF0 RNA5SP140-201ENST00000364524 92 ntBASIC5.73□□□□□ -1.49
SNX18Q96RF0 SNORA64.3-201ENST00000365647 134 ntBASIC5.73□□□□□ -1.49
SNX18Q96RF0 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SNX18Q96RF0 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.73□□□□□ -1.49
SNX18Q96RF0 UBE2V1P14-201ENST00000415815 558 ntBASIC5.73□□□□□ -1.49
SNX18Q96RF0 AL158050.1-201ENST00000416077 457 ntBASIC5.73□□□□□ -1.49
SNX18Q96RF0 GLUD1P9-201ENST00000420997 1173 ntBASIC5.73□□□□□ -1.49
SNX18Q96RF0 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.73□□□□□ -1.49
SNX18Q96RF0 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC5.73□□□□□ -1.49
SNX18Q96RF0 AL365220.1-201ENST00000432923 399 ntBASIC5.73□□□□□ -1.49
SNX18Q96RF0 ELOCP11-201ENST00000436690 332 ntBASIC5.73□□□□□ -1.49
SNX18Q96RF0 PCNPP2-201ENST00000441651 455 ntBASIC5.73□□□□□ -1.49
SNX18Q96RF0 ELOCP16-201ENST00000444494 332 ntBASIC5.73□□□□□ -1.49
SNX18Q96RF0 AL157884.3-201ENST00000448273 1184 ntBASIC5.73□□□□□ -1.49
SNX18Q96RF0 CCRL1P1-201ENST00000449542 1053 ntBASIC5.73□□□□□ -1.49
SNX18Q96RF0 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.73□□□□□ -1.49
SNX18Q96RF0 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.73□□□□□ -1.49
SNX18Q96RF0 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.73□□□□□ -1.49
SNX18Q96RF0 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.73□□□□□ -1.49
SNX18Q96RF0 AC098818.1-201ENST00000478593 252 ntBASIC5.73□□□□□ -1.49
SNX18Q96RF0 AC021087.2-201ENST00000504656 1203 ntBASIC5.73□□□□□ -1.49
SNX18Q96RF0 SUMO2P5-201ENST00000506790 245 ntBASIC5.73□□□□□ -1.49
SNX18Q96RF0 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.73□□□□□ -1.49
SNX18Q96RF0 RN7SKP183-201ENST00000517169 324 ntBASIC5.73□□□□□ -1.49
SNX18Q96RF0 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.73□□□□□ -1.49
SNX18Q96RF0 COX6B1P4-201ENST00000519826 484 ntBASIC5.73□□□□□ -1.49
SNX18Q96RF0 AC116917.1-201ENST00000520558 305 ntBASIC5.73□□□□□ -1.49
SNX18Q96RF0 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.73□□□□□ -1.49
SNX18Q96RF0 AP003033.2-201ENST00000528901 805 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms